The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000350l.22 | |
| PMEG.utg000350l.24 | OPSIN |
| PMEG.utg000350l.25 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| PMEG.utg000350l.26 | TRANSFORMER-2-RELATED |
| PMEG.utg000350l.27 | MATRIX PROTEIN, PUTATIVE-RELATED |
| PMEG.utg000350l.3 | NEUROPEPTIDE Y RECEPTOR |
| PMEG.utg000350l.4 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| PMEG.utg000350l.5 | |
| PMEG.utg000350l.6 | BAX INHIBITOR-RELATED |
| PMEG.utg000350l.7 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
| PMEG.utg000350l.8 | IFT140/172-RELATED |
| PMEG.utg000350l.9 | ACROSIN-RELATED |
| PMEG.utg000351l.1 | INHIBITOR OF APOPTOSIS |
| PMEG.utg000351l.10 | |
| PMEG.utg000351l.11 | HIGH MOBILITY GROUP PROTEIN 2 |
| PMEG.utg000351l.12 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
| PMEG.utg000351l.13 | CHITIN SYNTHASE |
| PMEG.utg000351l.14 | PROTEIN CBG25533 |
| PMEG.utg000351l.15 | NEPHRIN |
| PMEG.utg000351l.16 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 71 |
| PMEG.utg000351l.17 | PROTEASE M1 ZINC METALLOPROTEASE |
| PMEG.utg000351l.18 | PROTEASE M1 ZINC METALLOPROTEASE |
| PMEG.utg000351l.19 | |
| PMEG.utg000351l.2 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
| PMEG.utg000351l.3 | BTB/POZ DOMAIN-CONTAINING |
| PMEG.utg000351l.4 | DRAB11-RELATED |
| PMEG.utg000351l.5 | E3 UBIQUITIN-PROTEIN LIGASE RNF180 |
| PMEG.utg000351l.6 | |
| PMEG.utg000351l.7 | ANKYRIN REPEAT PROTEIN |
| PMEG.utg000351l.8 | TALIN ROD DOMAIN-CONTAINING PROTEIN 1 |
| PMEG.utg000352l.1 | REGULATOR OF G-PROTEIN SIGNALING LOCO |
| PMEG.utg000353l.1 | TRANSDUCIN BETA-LIKE 3 |
| PMEG.utg000354l.1 | |
| PMEG.utg000354l.2 | STIMULATOR OF INTERFERON GENES PROTEIN |
| PMEG.utg000356l.1 | MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B |
| PMEG.utg000356l.10 | PROLINE AND SERINE-RICH PROTEIN 3 |
| PMEG.utg000356l.11 | HOMEO BOX HB9 LIKE A-RELATED |
| PMEG.utg000356l.2 | AMMONIUM TRANSPORTER |
| PMEG.utg000356l.3 | AMMONIUM TRANSPORTER |
| PMEG.utg000356l.4 | INTIMAL THICKNESS RECEPTOR-RELATED |
| PMEG.utg000356l.5 | PROTEIN SIDEKICK |
| PMEG.utg000356l.6 | CARBOHYDRATE SULFOTRANSFERASE |
| PMEG.utg000356l.7 | P53 INDUCED PROTEIN |
| PMEG.utg000356l.8 | 40S RIBOSOMAL PROTEIN S25 |
| PMEG.utg000356l.9 | PREFOLDIN SUBUNIT 2 |
| PMEG.utg000357l.10 | |
| PMEG.utg000357l.11 | - |
| PMEG.utg000357l.12 | |
| PMEG.utg000357l.13 | EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER |
| PMEG.utg000357l.14 |
