The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000339l.7 | GOLGI SNARE BET1-RELATED |
PMEG.utg000339l.8 | |
PMEG.utg000339l.9 | AMMONIUM TRANSPORTER |
PMEG.utg000340l.1 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8 |
PMEG.utg000340l.2 | |
PMEG.utg000340l.3 | NEPHRIN |
PMEG.utg000341l.1 | |
PMEG.utg000342l.1 | GLYCOSYL HYDROLASE |
PMEG.utg000342l.10 | |
PMEG.utg000342l.11 | WD40 REPEAT PROTEIN |
PMEG.utg000342l.12 | |
PMEG.utg000342l.13 | SERINE/ARGININE REPETITIVE MATRIX PROTEIN 3-RELATED |
PMEG.utg000342l.14 | DNA REPAIR PROTEIN RAD51 HOMOLOG 4 |
PMEG.utg000342l.15 | NUDIX HYDROLASE RELATED |
PMEG.utg000342l.16 | PROBABLE PEPTIDE CHAIN RELEASE FACTOR C12ORF65 |
PMEG.utg000342l.17 | M-PHASE PHOSPHOPROTEIN 9 |
PMEG.utg000342l.18 | PR DOMAIN ZINC FINGER PROTEIN |
PMEG.utg000342l.19 | |
PMEG.utg000342l.2 | GLYCOSYL HYDROLASE |
PMEG.utg000342l.20 | UNCHARACTERIZED |
PMEG.utg000342l.21 | UNCHARACTERIZED |
PMEG.utg000342l.22 | SI:DKEY-261L7.2 |
PMEG.utg000342l.23 | CORONIN |
PMEG.utg000342l.24 | NA+/CA2+ K+ INDEPENDENT EXCHANGER |
PMEG.utg000342l.25 | COILIN |
PMEG.utg000342l.26 | HL07962P-RELATED |
PMEG.utg000342l.27 | GLUTATHIONE REDUCTASE |
PMEG.utg000342l.28 | BCL7 RELATED |
PMEG.utg000342l.3 | HISTIDINE-RICH GLYCOPROTEIN |
PMEG.utg000342l.30 | IMP2'P |
PMEG.utg000342l.31 | USP DOMAIN-CONTAINING PROTEIN |
PMEG.utg000342l.32 | GOS-28 SNARE- RELATED |
PMEG.utg000342l.33 | CENTROMERE PROTEIN V |
PMEG.utg000342l.34 | |
PMEG.utg000342l.35 | SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT |
PMEG.utg000342l.36 | ZINC FINGER, CCHC DOMAIN CONTAINING 8 |
PMEG.utg000342l.37 | CYTOKINE RECEPTOR |
PMEG.utg000342l.4 | 60S RIBOSOMAL PROTEIN L23A |
PMEG.utg000342l.5 | RAS-RELATED PROTEIN RAB |
PMEG.utg000342l.6 | NUCLEOREDOXIN |
PMEG.utg000342l.7 | PROTEIN PHOSPHATASE 2C |
PMEG.utg000342l.8 | DNA REPAIR PROTEIN RAD9 |
PMEG.utg000342l.9 | VACUOLAR SORTING PROTEIN VPS29 |
PMEG.utg000343l.1 | MSF1/PX19 RELATED |
PMEG.utg000343l.2 | FLAVIN MONOAMINE OXIDASE |
PMEG.utg000343l.3 | TRANSPORTIN 3 AND IMPORTIN 13 |
PMEG.utg000343l.4 | PROTEIN AD-016-RELATED |
PMEG.utg000343l.5 | BETA-1,4-GALACTOSYLTRANSFERASE |
PMEG.utg000344l.1 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
PMEG.utg000344l.10 | NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 |