The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000334l.74 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
PMEG.utg000334l.75 | NEUROTRANSMITTER GATED ION CHANNEL |
PMEG.utg000334l.76 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
PMEG.utg000334l.77 | OXIDASE/PEROXIDASE |
PMEG.utg000334l.78 | PROTEASE S51 ALPHA-ASPARTYL DIPEPTIDASE |
PMEG.utg000334l.79 | O-ACYLTRANSFERASE |
PMEG.utg000334l.8 | SNRNP CORE PROTEIN FAMILY MEMBER |
PMEG.utg000334l.80 | ARGININOSUCCINATE SYNTHASE |
PMEG.utg000334l.82 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
PMEG.utg000334l.83 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
PMEG.utg000334l.84 | LIM/HOMEOBOX PROTEIN LHX |
PMEG.utg000334l.85 | LIM/HOMEOBOX PROTEIN LHX |
PMEG.utg000334l.86 | E3 UBIQUITIN-PROTEIN LIGASE UBR4 |
PMEG.utg000334l.87 | TUBULIN POLYGLUTAMYLASE |
PMEG.utg000334l.88 | NEUTROPHIL CYTOSOLIC FACTOR 2, NEUTROPHIL NADPH OXIDASE FACTOR 2 |
PMEG.utg000334l.89 | |
PMEG.utg000334l.9 | DENN DOMAIN-CONTAINING |
PMEG.utg000334l.90 | ATP-BINDING TRANSPORT PROTEIN-RELATED |
PMEG.utg000334l.91 | |
PMEG.utg000334l.92 | UNCHARACTERIZED |
PMEG.utg000334l.93 | |
PMEG.utg000334l.94 | F-BOX ONLY PROTEIN 38 |
PMEG.utg000334l.95 | DNA POLYMERASE EPSILON SUBUNIT 3 |
PMEG.utg000334l.96 | CASEIN KINASE II SUBUNIT BETA |
PMEG.utg000334l.97 | |
PMEG.utg000334l.98 | PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER |
PMEG.utg000334l.99 | ANOSMIN |
PMEG.utg000335l.1 | KELCH PROTEIN |
PMEG.utg000335l.10 | INSULIN RECEPTOR SUBSTRATE |
PMEG.utg000335l.11 | RNA BINDING PROTEIN PUMILIO-RELATED |
PMEG.utg000335l.12 | CLATHRIN LIGHT CHAIN |
PMEG.utg000335l.13 | |
PMEG.utg000335l.14 | F-BOX ONLY PROTEIN 5 AND 43 |
PMEG.utg000335l.15 | TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN34-RELATED |
PMEG.utg000335l.16 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
PMEG.utg000335l.17 | PUTATIVE HOMEODOMAIN TRANSCRIPTION FACTOR PHTF |
PMEG.utg000335l.18 | BETA-1,4-GALACTOSYLTRANSFERASE |
PMEG.utg000335l.19 | |
PMEG.utg000335l.2 | |
PMEG.utg000335l.20 | CALPAIN |
PMEG.utg000335l.21 | |
PMEG.utg000335l.22 | - |
PMEG.utg000335l.23 | ACROSIN-RELATED |
PMEG.utg000335l.24 | RIBOSOMAL PROTEIN L30 |
PMEG.utg000335l.25 | WD REPEAT DOMAIN-RELATED |
PMEG.utg000335l.26 | PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED |
PMEG.utg000335l.27 | 60S ACIDIC RIBOSOMAL PROTEIN P1 |
PMEG.utg000335l.28 | RNA BINDING PROTEIN |
PMEG.utg000335l.29 | TETRATRICOPEPTIDE REPEAT PROTEIN 38 |
PMEG.utg000335l.3 | GUANYLYL CYCLASE |