The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000332l.4 | TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 5 |
PMEG.utg000332l.5 | |
PMEG.utg000332l.6 | |
PMEG.utg000332l.7 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
PMEG.utg000332l.8 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
PMEG.utg000332l.9 | CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18 |
PMEG.utg000333l.1 | CORONIN |
PMEG.utg000333l.2 | DULLARD PROTEIN PHOSPHATASE |
PMEG.utg000334l.1 | CHROMOSOME 1 OPEN READING FRAME 112 |
PMEG.utg000334l.10 | 39S RIBOSOMAL PROTEIN L14, MITOCHONDRIAL |
PMEG.utg000334l.100 | PROTEIN SCAI |
PMEG.utg000334l.101 | FOLYLPOLYGLUTAMATE SYNTHASE-RELATED |
PMEG.utg000334l.102 | UNCHARACTERIZED |
PMEG.utg000334l.103 | |
PMEG.utg000334l.104 | CYTOSOLIC PHOSPHOLIPASE A2 |
PMEG.utg000334l.105 | PROSTAGLANDIN G/H SYNTHASE |
PMEG.utg000334l.106 | GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1 |
PMEG.utg000334l.107 | ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARC |
PMEG.utg000334l.108 | 60S RIBOSOMAL PROTEIN L35 |
PMEG.utg000334l.109 | SOLUTE CARRIER FAMILY 5 |
PMEG.utg000334l.11 | TRANSMEMBRANE PROTEIN 2-RELATED |
PMEG.utg000334l.110 | KELCH PROTEIN |
PMEG.utg000334l.111 | |
PMEG.utg000334l.112 | INTEGRIN ALPHA REPEAT DOMAIN-CONTAINING |
PMEG.utg000334l.113 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
PMEG.utg000334l.114 | DIMETHYLANILINE MONOOXYGENASE |
PMEG.utg000334l.115 | MAMMALIAN EPENDYMIN-RELATED PROTEIN 1 |
PMEG.utg000334l.116 | MAMMALIAN EPENDYMIN-RELATED PROTEIN 1 |
PMEG.utg000334l.117 | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1 |
PMEG.utg000334l.118 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 77 |
PMEG.utg000334l.119 | ZINC FINGER CCCH-TYPE WITH G PATCH DOMAIN-CONTAINING PROTEIN |
PMEG.utg000334l.12 | BAND 7 PROTEIN-RELATED |
PMEG.utg000334l.120 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
PMEG.utg000334l.121 | |
PMEG.utg000334l.122 | CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING |
PMEG.utg000334l.123 | OS-9-RELATED |
PMEG.utg000334l.124 | |
PMEG.utg000334l.125 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5 |
PMEG.utg000334l.126 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED |
PMEG.utg000334l.127 | EGF-LIKE-DOMAIN, MULTIPLE 7, 8 |
PMEG.utg000334l.128 | ZINC FINGER PROTEIN |
PMEG.utg000334l.129 | |
PMEG.utg000334l.13 | BAND 7 PROTEIN-RELATED |
PMEG.utg000334l.130 | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS |
PMEG.utg000334l.131 | ENHANCER OF POLYCOMB |
PMEG.utg000334l.132 | GERANYLGERANYL PYROPHOSPHATE SYNTHASE |
PMEG.utg000334l.133 | ATILLA, ISOFORM B-RELATED-RELATED |
PMEG.utg000334l.134 | DUAL OXIDASE 2 |
PMEG.utg000334l.135 | NADPH OXIDASE |
PMEG.utg000334l.136 | PYRUVATE DEHYDROGENASE KINASE |