The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000304l.20 | KN MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING |
| PMEG.utg000304l.21 | |
| PMEG.utg000304l.22 | ADENYLOSUCCINATE LYASE |
| PMEG.utg000304l.23 | SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1 |
| PMEG.utg000304l.24 | TFIIF-ALPHA |
| PMEG.utg000304l.25 | F-BOX ONLY PROTEIN 4 |
| PMEG.utg000304l.26 | SAM DOMAIN-CONTAINING PROTEIN-RELATED |
| PMEG.utg000304l.27 | SAM DOMAIN-CONTAINING PROTEIN-RELATED |
| PMEG.utg000304l.28 | SI:DKEY-19B23.12-RELATED |
| PMEG.utg000304l.29 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
| PMEG.utg000304l.3 | - |
| PMEG.utg000304l.30 | |
| PMEG.utg000304l.31 | 4.1 G PROTEIN |
| PMEG.utg000304l.32 | KETOACID-COENZYME A TRANSFERASE |
| PMEG.utg000304l.33 | MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN |
| PMEG.utg000304l.34 | |
| PMEG.utg000304l.35 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| PMEG.utg000304l.36 | CYSTEINE AND GLYCINE-RICH PROTEIN 2 BINDING PROTEIN |
| PMEG.utg000304l.37 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER |
| PMEG.utg000304l.38 | STATHMIN |
| PMEG.utg000304l.39 | |
| PMEG.utg000304l.4 | HYALURONIC ACID-BINDING PROTEIN 4 |
| PMEG.utg000304l.40 | CHITINASE |
| PMEG.utg000304l.41 | SCAVENGER RECEPTOR CLASS F |
| PMEG.utg000304l.43 | SCAVENGER RECEPTOR CLASS F |
| PMEG.utg000304l.44 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| PMEG.utg000304l.45 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| PMEG.utg000304l.47 | RADIAL SPOKE HEAD 10 HOMOLOG B-RELATED |
| PMEG.utg000304l.48 | TYROSINE-PROTEIN KINASE RECEPTOR |
| PMEG.utg000304l.49 | LIPASE |
| PMEG.utg000304l.5 | ZINC FINGER PROTEIN ZIC AND GLI |
| PMEG.utg000304l.50 | LIPASE |
| PMEG.utg000304l.51 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| PMEG.utg000304l.52 | SCAVENGER RECEPTOR CLASS F |
| PMEG.utg000304l.53 | EH DOMAIN |
| PMEG.utg000304l.54 | OXYSTEROL-BINDING PROTEIN-RELATED |
| PMEG.utg000304l.55 | |
| PMEG.utg000304l.56 | UNHEALTHY RIBOSOME BIOGENESIS PROTEIN 2 HOMOLOG |
| PMEG.utg000304l.57 | UNHEALTHY RIBOSOME BIOGENESIS PROTEIN 2 HOMOLOG |
| PMEG.utg000304l.58 | |
| PMEG.utg000304l.59 | LEUCOKININ RECEPTOR-RELATED |
| PMEG.utg000304l.6 | TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA |
| PMEG.utg000304l.60 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| PMEG.utg000304l.61 | |
| PMEG.utg000304l.62 | |
| PMEG.utg000304l.63 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| PMEG.utg000304l.64 | D-AMINO ACID OXIDASE |
| PMEG.utg000304l.65 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| PMEG.utg000304l.66 | TETRATRICOPEPTIDE REPEAT PROTEIN 4 |
| PMEG.utg000304l.67 | DIMETHYLADENOSINE TRANSFERASE |
