The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000294l.190 | HISTONE DEACETYLASE HDAC1-RELATED |
PMEG.utg000294l.192 | ADIPOR/PROGESTIN RECEPTOR-RELATED |
PMEG.utg000294l.193 | |
PMEG.utg000294l.194 | LEUCINE RICH REPEAT FAMILY PROTEIN |
PMEG.utg000294l.195 | SULFATE TRANSPORTER |
PMEG.utg000294l.196 | |
PMEG.utg000294l.197 | ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 |
PMEG.utg000294l.198 | STRICTOSIDINE SYNTHASE-RELATED |
PMEG.utg000294l.2 | UNCHARACTERIZED |
PMEG.utg000294l.20 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
PMEG.utg000294l.21 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
PMEG.utg000294l.22 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
PMEG.utg000294l.23 | NISCHARIN RELATED |
PMEG.utg000294l.24 | |
PMEG.utg000294l.25 | HOMEOBOX PROTEIN |
PMEG.utg000294l.26 | ECTOPIC P GRANULES PROTEIN 5 HOMOLOG |
PMEG.utg000294l.27 | DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN |
PMEG.utg000294l.28 | MULTI-COPPER OXIDASE |
PMEG.utg000294l.29 | REELIN |
PMEG.utg000294l.3 | PROTEIN CBG13728 |
PMEG.utg000294l.30 | ORIGIN RECOGNITION COMPLEX SUBUNIT 5 |
PMEG.utg000294l.31 | LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN |
PMEG.utg000294l.32 | ORF PROTEIN |
PMEG.utg000294l.34 | COPINE |
PMEG.utg000294l.35 | SLR1189 PROTEIN |
PMEG.utg000294l.36 | CYTOCHROME P450 FAMILY 4 |
PMEG.utg000294l.37 | ABC TRANSPORTER G FAMILY MEMBER 28 |
PMEG.utg000294l.38 | ZGC:174356 |
PMEG.utg000294l.39 | |
PMEG.utg000294l.4 | COATOMER SUBUNIT GAMMA |
PMEG.utg000294l.40 | KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG |
PMEG.utg000294l.41 | LEUKOTRIENE A-4 HYDROLASE |
PMEG.utg000294l.42 | TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN |
PMEG.utg000294l.43 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED |
PMEG.utg000294l.44 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED |
PMEG.utg000294l.45 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED |
PMEG.utg000294l.46 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED |
PMEG.utg000294l.47 | LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN |
PMEG.utg000294l.48 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED |
PMEG.utg000294l.49 | GH11602P |
PMEG.utg000294l.5 | DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED |
PMEG.utg000294l.50 | RIBOSOME BIOGENESIS PROTEIN |
PMEG.utg000294l.51 | LIN37 HOMOLOG |
PMEG.utg000294l.52 | RGD1561648 |
PMEG.utg000294l.53 | RGD1561648 |
PMEG.utg000294l.54 | |
PMEG.utg000294l.55 | |
PMEG.utg000294l.56 | PROTEIN TORNADO 1 |
PMEG.utg000294l.57 | 60 KDA RIBONUCLEOPROTEIN SSA/RO |
PMEG.utg000294l.58 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED |