The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000298l.11 | GLYCOSYL HYDROLASE |
PMEG.utg000298l.12 | GLYCOSYL HYDROLASE |
PMEG.utg000298l.13 | NITRILASE C965.09-RELATED |
PMEG.utg000298l.14 | PROTEIN PHOSPHATASE |
PMEG.utg000298l.15 | MICRORNA PROCESSOR COMPLEX SUBUNIT DGCR8 |
PMEG.utg000298l.16 | MICRORNA PROCESSOR COMPLEX SUBUNIT DGCR8 |
PMEG.utg000298l.17 | |
PMEG.utg000298l.18 | UNCHARACTERIZED |
PMEG.utg000298l.19 | ZINC METALLOPROTEINASE-RELATED |
PMEG.utg000298l.2 | EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN |
PMEG.utg000298l.20 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
PMEG.utg000298l.21 | HELICASE SRCAP-RELATED |
PMEG.utg000298l.22 | NUCLEOLAR COMPLEX PROTEIN 4 |
PMEG.utg000298l.23 | MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE |
PMEG.utg000298l.24 | PROTEIN SIDEKICK |
PMEG.utg000298l.25 | |
PMEG.utg000298l.26 | N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED |
PMEG.utg000298l.27 | WD-40 REPEAT PROTEIN |
PMEG.utg000298l.28 | |
PMEG.utg000298l.3 | CALCIUM BINDING PROTEIN |
PMEG.utg000298l.4 | CALCIUM-TRANSPORTING ATPASE |
PMEG.utg000298l.5 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15 |
PMEG.utg000298l.6 | UNCHARACTERIZED |
PMEG.utg000298l.7 | NUCLEAR MITOTIC APPARATUS PROTEIN 1-RELATED |
PMEG.utg000298l.8 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
PMEG.utg000298l.9 | GLYCOSYL HYDROLASE |
PMEG.utg000299l.1 | ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED |
PMEG.utg000300l.1 | TRANSCRIPTION COFACTOR VESTIGIAL-LIKE PROTEIN |
PMEG.utg000300l.2 | TRANSCRIPTION COFACTOR VESTIGIAL-LIKE PROTEIN |
PMEG.utg000300l.3 | SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2 |
PMEG.utg000300l.4 | NOTUM-RELATED |
PMEG.utg000301l.1 | |
PMEG.utg000301l.2 | |
PMEG.utg000301l.3 | ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED |
PMEG.utg000301l.4 | FUMARYLACETOACETASE |
PMEG.utg000301l.5 | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN |
PMEG.utg000301l.6 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
PMEG.utg000301l.7 | |
PMEG.utg000304l.1 | NETRIN/LAMININ-RELATED |
PMEG.utg000304l.10 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
PMEG.utg000304l.11 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
PMEG.utg000304l.12 | FATTY ACID ACYL TRANSFERASE-RELATED |
PMEG.utg000304l.13 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I |
PMEG.utg000304l.14 | COILED-COIL DOMAIN-CONTAINING PROTEIN 189 |
PMEG.utg000304l.15 | PROTEIN CBG12474 |
PMEG.utg000304l.16 | PROTEIN CBG12474 |
PMEG.utg000304l.17 | SPERMATOGENESIS-ASSOCIATED PROTEIN 6 SPATA6 |
PMEG.utg000304l.18 | SOMETHING ABOUT SILENCING PROTEIN 10-RELATED |
PMEG.utg000304l.19 | TYROSINE-PROTEIN KINASE |
PMEG.utg000304l.2 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |