The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000308l.12 | SH3 AND MULTIPLE ANKYRIN REPEAT DOMAINS PROTEIN |
| PMEG.utg000308l.13 | - |
| PMEG.utg000308l.14 | PARAOXONASE |
| PMEG.utg000308l.15 | OVOCHYMASE-RELATED |
| PMEG.utg000308l.16 | |
| PMEG.utg000308l.17 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS |
| PMEG.utg000308l.2 | CUE DOMAIN CONTAINING 2 |
| PMEG.utg000308l.3 | 30S/40S RIBOSOMAL PROTEIN S4 |
| PMEG.utg000308l.4 | ZINC FINGER PROTEIN ZIC AND GLI |
| PMEG.utg000308l.5 | SODIUM/POTASSIUM-DEPENDENT ATPASE BETA SUBUNIT |
| PMEG.utg000308l.6 | PRE-MRNA-PROCESSING FACTOR 17 |
| PMEG.utg000308l.7 | WASP-1 |
| PMEG.utg000308l.8 | LIG_CHAN-GLU_BD DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000308l.9 | MALIC ENZYME-RELATED |
| PMEG.utg000309l.1 | OROFACIAL CLEFT 1 CANDIDATE GENE 1 PROTEIN |
| PMEG.utg000309l.2 | PROLYL 4-HYDROXYLASE ALPHA SUBUNIT |
| PMEG.utg000309l.3 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| PMEG.utg000309l.4 | BANK1/PIK3AP1 FAMILY MEMBER |
| PMEG.utg000310l.1 | PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE |
| PMEG.utg000310l.10 | - |
| PMEG.utg000310l.11 | - |
| PMEG.utg000310l.12 | |
| PMEG.utg000310l.2 | PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE |
| PMEG.utg000310l.3 | PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE |
| PMEG.utg000310l.4 | PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE |
| PMEG.utg000310l.5 | UBIQUITIN-ACTIVATING ENZYME E1 |
| PMEG.utg000310l.6 | WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER |
| PMEG.utg000310l.7 | - |
| PMEG.utg000310l.8 | - |
| PMEG.utg000310l.9 | - |
| PMEG.utg000312l.1 | PROTEIN DD3-3 |
| PMEG.utg000312l.11 | LIM DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000312l.12 | MIP04163P |
| PMEG.utg000312l.13 | MIP04163P |
| PMEG.utg000312l.14 | CDNA SEQUENCE BC048562 |
| PMEG.utg000312l.15 | |
| PMEG.utg000312l.16 | G PATCH AND KOW-CONTAINING |
| PMEG.utg000312l.2 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
| PMEG.utg000312l.3 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| PMEG.utg000312l.4 | UNCHARACTERIZED |
| PMEG.utg000312l.5 | CENTROSOMAL PROTEIN OF 170 KDA |
| PMEG.utg000312l.6 | |
| PMEG.utg000312l.7 | JITTERBUG, ISOFORM N |
| PMEG.utg000312l.8 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| PMEG.utg000312l.9 | SULFATASE MODIFYING FACTOR 1, 2 |
| PMEG.utg000313l.1 | MONOCARBOXYLATE TRANSPORTER |
| PMEG.utg000313l.10 | |
| PMEG.utg000313l.11 | MOLTING PROTEIN MLT-4 |
| PMEG.utg000313l.12 | COLLAGEN ALPHA |
| PMEG.utg000313l.13 | COILED-COIL DOMAIN-CONTAINING PROTEIN 14 |
