The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000304l.68 | UNCHARACTERIZED |
PMEG.utg000304l.69 | CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18 |
PMEG.utg000304l.7 | ANTERIOR GRADIENT PROTEIN-RELATED |
PMEG.utg000304l.71 | ARMADILLO REPEAT-CONTAINING PROTEIN 1 |
PMEG.utg000304l.72 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
PMEG.utg000304l.73 | TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER |
PMEG.utg000304l.74 | CYTOSOLIC CARBOXYPEPTIDASE |
PMEG.utg000304l.75 | UNCHARACTERIZED |
PMEG.utg000304l.76 | LYSOPHOSPHOLIPASE-RELATED |
PMEG.utg000304l.77 | RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 |
PMEG.utg000304l.78 | MITOCHONDRIAL RIBOSOME PROTEIN L39/PROLYL-TRNA LIGASE FAMILY MEMBER |
PMEG.utg000304l.79 | DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT |
PMEG.utg000304l.8 | ATP-DEPENDENT RNA AND DNA HELICASE |
PMEG.utg000304l.80 | TRNA DIMETHYLALLYLTRANSFERASE |
PMEG.utg000304l.82 | UNCHARACTERIZED |
PMEG.utg000304l.83 | AGAP005440-PA |
PMEG.utg000304l.84 | |
PMEG.utg000304l.85 | INOSINE TRIPHOSPHATE PYROPHOSPHATASE/HAM1 PROTEIN |
PMEG.utg000304l.86 | TRANSLATION FACTOR |
PMEG.utg000304l.87 | OXIDATIVE STRESS-RESPONSE SERINE-RICH PROTEIN 1 |
PMEG.utg000304l.88 | |
PMEG.utg000304l.89 | |
PMEG.utg000304l.9 | ANION EXCHANGE PROTEIN |
PMEG.utg000304l.90 | |
PMEG.utg000304l.91 | IGGFC_BINDING DOMAIN-CONTAINING PROTEIN |
PMEG.utg000304l.92 | |
PMEG.utg000304l.93 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
PMEG.utg000304l.94 | FTP DOMAIN-CONTAINING PROTEIN |
PMEG.utg000304l.95 | |
PMEG.utg000304l.96 | TRANSCRIPTION FACTOR CP2 |
PMEG.utg000305l.1 | BTB/POZ DOMAIN-CONTAINING PROTEIN 19 |
PMEG.utg000305l.10 | |
PMEG.utg000305l.11 | NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B |
PMEG.utg000305l.2 | |
PMEG.utg000305l.3 | LD24721P |
PMEG.utg000305l.4 | UNCHARACTERIZED |
PMEG.utg000305l.5 | LD33804P |
PMEG.utg000305l.6 | DNA2/NAM7 HELICASE FAMILY |
PMEG.utg000305l.7 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
PMEG.utg000305l.8 | PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN |
PMEG.utg000305l.9 | CYTOKINE RECEPTOR |
PMEG.utg000307l.1 | SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS |
PMEG.utg000307l.2 | SULFATASE MODIFYING FACTOR 1, 2 |
PMEG.utg000307l.3 | METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED |
PMEG.utg000307l.5 | CHLORIDE CHANNEL CLIC-LIKE PROTEIN 1 |
PMEG.utg000307l.6 | - |
PMEG.utg000307l.7 | FERM AND PDZ DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
PMEG.utg000308l.1 | PARAOXONASE |
PMEG.utg000308l.10 | DRAB11-RELATED |
PMEG.utg000308l.11 | SH3 AND MULTIPLE ANKYRIN REPEAT DOMAINS PROTEIN |