The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000313l.14 | |
| PMEG.utg000313l.15 | NUCLEAR HORMONE RECEPTOR HR3-RELATED |
| PMEG.utg000313l.17 | FATTY ACID DESATURASE 2 |
| PMEG.utg000313l.2 | VESICULAR-FUSION PROTEIN NSF |
| PMEG.utg000313l.3 | WNT RELATED |
| PMEG.utg000313l.4 | WNT RELATED |
| PMEG.utg000313l.5 | WNT RELATED |
| PMEG.utg000313l.6 | WNT RELATED |
| PMEG.utg000313l.7 | |
| PMEG.utg000313l.8 | NF-KAPPA-B INHIBITOR ALPHA |
| PMEG.utg000313l.9 | KREV INTERACTION TRAPPED 1-RELATED |
| PMEG.utg000314l.1 | UNCHARACTERIZED |
| PMEG.utg000316l.1 | SERINE/THREONINE-PROTEIN KINASE |
| PMEG.utg000316l.2 | STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER |
| PMEG.utg000316l.3 | STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER |
| PMEG.utg000316l.4 | ATP-DEPENDENT DNA HELICASE |
| PMEG.utg000317l.1 | |
| PMEG.utg000317l.10 | CYTOCHROME C1 |
| PMEG.utg000317l.11 | GLUCOSE-6-PHOSPHATE ISOMERASE |
| PMEG.utg000317l.12 | |
| PMEG.utg000317l.14 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| PMEG.utg000317l.15 | ABC1 FAMILY PROTEIN |
| PMEG.utg000317l.16 | RAS-RESPONSIVE ELEMENT-BINDING PROTEIN 1 |
| PMEG.utg000317l.2 | TYROSINASE FAMILY MEMBER |
| PMEG.utg000317l.3 | TYROSINASE FAMILY MEMBER |
| PMEG.utg000317l.4 | ATP-DEPENDENT PROTEASE |
| PMEG.utg000317l.5 | TUBULIN |
| PMEG.utg000317l.6 | MACROGLOBULIN / COMPLEMENT |
| PMEG.utg000317l.7 | AMINO ACID TRANSPORTER |
| PMEG.utg000317l.8 | AQUAPORIN TRANSPORTER |
| PMEG.utg000317l.9 | GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN |
| PMEG.utg000318l.1 | LUPUS LA PROTEIN-RELATED |
| PMEG.utg000318l.2 | HISTONE-LYSINE N-METHYLTRANSFERASE SETD2 |
| PMEG.utg000318l.3 | |
| PMEG.utg000318l.4 | DNA PRIMASE LARGE SUBUNIT |
| PMEG.utg000318l.5 | |
| PMEG.utg000318l.6 | UBIQUITIN-CONJUGATING ENZYME E2 |
| PMEG.utg000318l.7 | INTERLEUKIN-1 RECEPTOR FAMILY MEMBER |
| PMEG.utg000318l.8 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| PMEG.utg000319l.1 | CALCYPHOSIN |
| PMEG.utg000319l.2 | ALCOHOL DEHYDROGENASE |
| PMEG.utg000319l.3 | ACTIVATING TRANSCRIPTION FACTOR ATF 4/5 |
| PMEG.utg000319l.4 | PHD FINGER-LIKE DOMAIN-CONTAINING PROTEIN 5A |
| PMEG.utg000319l.5 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| PMEG.utg000319l.6 | |
| PMEG.utg000319l.7 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| PMEG.utg000319l.8 | RECEPTOR FOR ACTIVATED PROTEIN KINASE C RACK1 |
| PMEG.utg000319l.9 | LD02310P |
| PMEG.utg000320l.1 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| PMEG.utg000320l.2 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
