The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000290l.18 | |
PMEG.utg000290l.19 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 1 |
PMEG.utg000290l.2 | CRUMBS FAMILY MEMBER |
PMEG.utg000290l.20 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 1 |
PMEG.utg000290l.21 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
PMEG.utg000290l.22 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
PMEG.utg000290l.23 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
PMEG.utg000290l.24 | DYNEIN ASSEMBLY FACTOR 5, AXONEMAL |
PMEG.utg000290l.25 | VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 3A |
PMEG.utg000290l.26 | RE74312P |
PMEG.utg000290l.27 | TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13 |
PMEG.utg000290l.28 | CENTROCORTIN FAMILY MEMBER |
PMEG.utg000290l.29 | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER |
PMEG.utg000290l.3 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
PMEG.utg000290l.30 | DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE RNA POLYMERASE III SUBUNIT 5 |
PMEG.utg000290l.31 | 28 KDA HEAT- AND ACID-STABLE PHOSPHOPROTEIN PDGF-ASSOCIATED PROTEIN |
PMEG.utg000290l.32 | PROTEIN BUD31-RELATED |
PMEG.utg000290l.4 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
PMEG.utg000290l.5 | PRE-MRNA-SPLICING FACTOR RBM22 |
PMEG.utg000290l.6 | WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED |
PMEG.utg000290l.7 | AT29763P-RELATED |
PMEG.utg000290l.8 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
PMEG.utg000290l.9 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
PMEG.utg000291l.1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
PMEG.utg000291l.10 | PHOSPHOGLYCERATE MUTASE |
PMEG.utg000291l.11 | PROTEIN TORNADO 1 |
PMEG.utg000291l.12 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY M MEMBER 2 |
PMEG.utg000291l.13 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
PMEG.utg000291l.14 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
PMEG.utg000291l.15 | |
PMEG.utg000291l.16 | RAN GUANINE NUCLEOTIDE RELEASE FACTOR |
PMEG.utg000291l.17 | ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED |
PMEG.utg000291l.18 | |
PMEG.utg000291l.19 | RAP GTPASE-ACTIVATING PROTEIN |
PMEG.utg000291l.2 | PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER |
PMEG.utg000291l.20 | |
PMEG.utg000291l.21 | TYPE-1 ANGIOTENSIN II RECEPTOR-ASSOCIATED PROTEIN |
PMEG.utg000291l.22 | PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR PEX5 |
PMEG.utg000291l.23 | SOLUTE CARRIER FAMILY 17 |
PMEG.utg000291l.24 | SOLUTE CARRIER FAMILY 17 |
PMEG.utg000291l.25 | SOLUTE CARRIER FAMILY 17 |
PMEG.utg000291l.26 | SOLUTE CARRIER FAMILY 17 |
PMEG.utg000291l.27 | INNER MEMBRANE TRANSPORTER YGJI-RELATED |
PMEG.utg000291l.3 | PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER |
PMEG.utg000291l.4 | POLYCOMB GROUP PROTEIN |
PMEG.utg000291l.5 | |
PMEG.utg000291l.6 | CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81 |
PMEG.utg000291l.7 | DEOXYNUCLEOSIDE KINASE |
PMEG.utg000291l.8 | PROHIBITIN |
PMEG.utg000291l.9 | RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATED |