The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000335l.31 | NADP-SPECIFIC ISOCITRATE DEHYDROGENASE |
PMEG.utg000335l.32 | NAD(P) TRANSHYDROGENASE |
PMEG.utg000335l.33 | CYTOCHROME P450 508A4-RELATED |
PMEG.utg000335l.34 | |
PMEG.utg000335l.35 | |
PMEG.utg000335l.36 | AGAP008221-PA |
PMEG.utg000335l.37 | SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED |
PMEG.utg000335l.38 | U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEIN |
PMEG.utg000335l.39 | SOLUTE CARRIER FAMILY 35 |
PMEG.utg000335l.4 | AQUAPORIN TRANSPORTER |
PMEG.utg000335l.40 | NYD-SP28 PROTEIN |
PMEG.utg000335l.41 | 60S RIBOSOMAL PROTEIN L11-RELATED |
PMEG.utg000335l.42 | DIACYLGLYCEROL KINASE |
PMEG.utg000335l.43 | ZINC FINGER PROTEIN |
PMEG.utg000335l.44 | - |
PMEG.utg000335l.45 | FI01416P |
PMEG.utg000335l.46 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
PMEG.utg000335l.47 | |
PMEG.utg000335l.48 | KICSTOR COMPLEX PROTEIN C12ORF66 |
PMEG.utg000335l.49 | |
PMEG.utg000335l.5 | ARSENITE-RESISTANCE PROTEIN 2 |
PMEG.utg000335l.50 | PHD FINGER PROTEIN 20-RELATED |
PMEG.utg000335l.51 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED |
PMEG.utg000335l.52 | TOLL-LIKE RECEPTOR |
PMEG.utg000335l.53 | ARMADILLO-TYPE FOLD-RELATED |
PMEG.utg000335l.54 | VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 5A |
PMEG.utg000335l.55 | ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN |
PMEG.utg000335l.56 | REACTIVE OXYGEN SPECIES MODULATOR 1 |
PMEG.utg000335l.57 | |
PMEG.utg000335l.58 | ARCHEASE |
PMEG.utg000335l.6 | GDP-L-FUCOSE SYNTHASE |
PMEG.utg000335l.60 | |
PMEG.utg000335l.61 | PHOSPHOFRUCTOKINASE |
PMEG.utg000335l.62 | 60S RIBOSOMAL PROTEIN L19 |
PMEG.utg000335l.63 | |
PMEG.utg000335l.64 | UNCHARACTERIZED PROTEIN YBCL-RELATED |
PMEG.utg000335l.65 | TUDOR DOMAIN CONTAINING PROTEIN |
PMEG.utg000335l.66 | HELIX LOOP HELIX PROTEIN 21-RELATED |
PMEG.utg000335l.67 | |
PMEG.utg000335l.68 | NITROGEN METABOLITE REPRESSION PROTEIN NMRA FAMILY MEMBER |
PMEG.utg000335l.69 | CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 |
PMEG.utg000335l.7 | DOPAMINE BETA HYDROXYLASE RELATED |
PMEG.utg000335l.70 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
PMEG.utg000335l.71 | PRE-MRNA SPLICING FACTOR |
PMEG.utg000335l.72 | OROFACIAL CLEFT 1 CANDIDATE GENE 1 PROTEIN |
PMEG.utg000335l.73 | PRE-MRNA SPLICING FACTOR |
PMEG.utg000335l.74 | ORGANIC ANION TRANSPORTER |
PMEG.utg000335l.75 | ORGANIC ANION TRANSPORTER |
PMEG.utg000335l.76 | UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEIN |
PMEG.utg000335l.77 | MYOSIN LIGHT CHAIN 1, 3 |