The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000346l.21 | VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED |
PMEG.utg000346l.22 | PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 |
PMEG.utg000346l.23 | MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN |
PMEG.utg000346l.24 | POLYCOMB GROUP PROTEIN |
PMEG.utg000346l.25 | POLYCOMB GROUP PROTEIN |
PMEG.utg000346l.26 | UDP-GLUCOSE 4-EPIMERASE |
PMEG.utg000346l.27 | PROTEIN C20ORF43 HOMOLOG |
PMEG.utg000346l.28 | LYSOSOMAL-ASSOCIATED TRANSMEMBRANE PROTEIN |
PMEG.utg000346l.29 | ARRESTIN DOMAIN CONTAINING PROTEIN |
PMEG.utg000346l.3 | CALCYPHOSIN |
PMEG.utg000346l.30 | PROTEIN C9ORF135 |
PMEG.utg000346l.31 | NETRIN/LAMININ-RELATED |
PMEG.utg000346l.4 | |
PMEG.utg000346l.5 | CENTROMERE PROTEIN C |
PMEG.utg000346l.6 | GOLGIN- RELATED |
PMEG.utg000346l.7 | SERINE/THREONINE PROTEIN KINASE |
PMEG.utg000346l.8 | N-LINKED OLIGOSACCHARIDE PROCESSING |
PMEG.utg000346l.9 | DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT |
PMEG.utg000347l.1 | FI21293P1 |
PMEG.utg000349l.1 | ZGC:113208 |
PMEG.utg000349l.10 | TUFTELIN-INTERACTING PROTEIN 11-RELATED |
PMEG.utg000349l.11 | RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED |
PMEG.utg000349l.12 | TRANSGELIN |
PMEG.utg000349l.13 | PROTEIN CBG04600 |
PMEG.utg000349l.14 | PEST PROTEOLYTIC SIGNAL-CONTAINING NUCLEAR PROTEIN |
PMEG.utg000349l.15 | PYRIDINE NUCLEOTIDE-DISULFIDE OXIDOREDUCTASE DOMAIN-CONTAINING |
PMEG.utg000349l.16 | PROTEIN O-MANNOSYL-TRANSFERASE TMTC2 |
PMEG.utg000349l.17 | |
PMEG.utg000349l.2 | |
PMEG.utg000349l.3 | SERINE/THREONINE PROTEIN KINASE |
PMEG.utg000349l.4 | HOMOGENTISATE 1,2-DIOXYGENASE |
PMEG.utg000349l.5 | TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIAL |
PMEG.utg000349l.6 | TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 |
PMEG.utg000349l.7 | RWD DOMAIN-CONTAINING PROTEIN |
PMEG.utg000349l.8 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
PMEG.utg000349l.9 | |
PMEG.utg000350l.1 | MYOSIN LIGHT CHAIN 1, 3 |
PMEG.utg000350l.10 | TRYPSIN-RELATED |
PMEG.utg000350l.11 | - |
PMEG.utg000350l.12 | BANK1/PIK3AP1 FAMILY MEMBER |
PMEG.utg000350l.13 | TYROSINE-PROTEIN KINASE RECEPTOR |
PMEG.utg000350l.14 | NOVEL ZZ TYPE ZINC FINGER DOMAIN CONTAINING PROTEIN |
PMEG.utg000350l.15 | TETRASPANIN |
PMEG.utg000350l.16 | RNA HELICASE |
PMEG.utg000350l.17 | NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 |
PMEG.utg000350l.18 | |
PMEG.utg000350l.19 | TRANSMEMBRANE CHANNEL-RELATED |
PMEG.utg000350l.2 | CALCIUM BINDING PROTEIN |
PMEG.utg000350l.20 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
PMEG.utg000350l.21 | PROTEIN CBG12474 |