About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10%28,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000379l.34UNCHARACTERIZED
PMEG.utg000379l.35RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF
PMEG.utg000379l.36SODIUM/POTASSIUM/CALCIUM EXCHANGER
PMEG.utg000379l.37UNCHARACTERIZED
PMEG.utg000379l.4SAM DOMAIN-CONTAINING PROTEIN-RELATED
PMEG.utg000379l.5-
PMEG.utg000379l.630S RIBOSOMAL PROTEIN S16
PMEG.utg000379l.7SRCR DOMAIN-CONTAINING PROTEIN
PMEG.utg000379l.8CARBOXYLIC ESTER HYDROLASE
PMEG.utg000379l.9CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
PMEG.utg000383l.1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
PMEG.utg000383l.10MICROSOMAL GLUTATHIONE S-TRANSFERASE
PMEG.utg000383l.2METHYLMALONYL-COA EPIMERASE
PMEG.utg000383l.3MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44
PMEG.utg000383l.4ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN
PMEG.utg000383l.5EGF-LIKE DOMAIN-CONTAINING PROTEIN
PMEG.utg000383l.6PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE
PMEG.utg000383l.8DOWNSTREAM NEIGHBOR OF SON
PMEG.utg000383l.9DOWNSTREAM NEIGHBOR OF SON
PMEG.utg000384l.1WD40 REPEAT DOMAIN 95
PMEG.utg000384l.2WD40 REPEAT DOMAIN 95
PMEG.utg000385l.1ZINC FINGER HOMEOBOX PROTEIN
PMEG.utg000385l.1060S RIBOSOMAL PROTEIN L14
PMEG.utg000385l.11D-LACTATE DEHYDROGENASE
PMEG.utg000385l.12PIKACHURIN-LIKE PROTEIN
PMEG.utg000385l.13ANAMORSIN
PMEG.utg000385l.14TARGETING PROTEIN FOR XKLP2
PMEG.utg000385l.15PROTEASOME ASSEMBLY CHAPERONE 2
PMEG.utg000385l.16DIMETHYLANILINE MONOOXYGENASE
PMEG.utg000385l.17DNA REPAIR/RNA PROCESSING CPSF FAMILY
PMEG.utg000385l.18CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4
PMEG.utg000385l.19KINESIN-LIKE PROTEIN KLP-3
PMEG.utg000385l.2
PMEG.utg000385l.20AQUAPORIN TRANSPORTER
PMEG.utg000385l.21
PMEG.utg000385l.22CENTROSOMAL PROTEIN OF 89 KDA
PMEG.utg000385l.23MACROGLOBULIN / COMPLEMENT
PMEG.utg000385l.24PROTEIN ARGININE N-METHYLTRANSFERASE
PMEG.utg000385l.25SODIUM/HYDROGEN EXCHANGER
PMEG.utg000385l.26ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY DOMAIN-CONTAINING PROTEIN 1
PMEG.utg000385l.27ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY DOMAIN-CONTAINING PROTEIN 1
PMEG.utg000385l.28CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN
PMEG.utg000385l.29DNA-DIRECTED RNA POLYMERASE
PMEG.utg000385l.3EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED
PMEG.utg000385l.4RNA_LIG_T4_1 DOMAIN-CONTAINING PROTEIN
PMEG.utg000385l.5ORF PROTEIN
PMEG.utg000385l.6CASEIN KINASE II SUBUNIT ALPHA
PMEG.utg000385l.7UNCHARACTERIZED
PMEG.utg000385l.8SODIUM/CHLORIDE DEPENDENT TRANSPORTER
PMEG.utg000385l.9LOC361192
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