The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000371l.22 | N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE |
PMEG.utg000371l.23 | POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 |
PMEG.utg000371l.24 | |
PMEG.utg000371l.25 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN |
PMEG.utg000371l.26 | SYNAPTOTAGMIN |
PMEG.utg000371l.27 | PROTEIN NETWORKED 4A |
PMEG.utg000371l.28 | RIBOSOME BIOGENESIS PROTEIN NSA2 HOMOLOG |
PMEG.utg000371l.29 | LD33804P |
PMEG.utg000371l.3 | NICALIN |
PMEG.utg000371l.30 | SOLUTE CARRIER FAMILY 22 MEMBER |
PMEG.utg000371l.31 | ARL14 EFFECTOR PROTEIN |
PMEG.utg000371l.32 | 4.1 G PROTEIN |
PMEG.utg000371l.33 | PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED |
PMEG.utg000371l.34 | PUTATIVE (AFU_ORTHOLOGUE AFUA_4G14580)-RELATED |
PMEG.utg000371l.35 | NUCLEAR HORMONE RECEPTOR |
PMEG.utg000371l.36 | THREONINE-TRNA LIGASE |
PMEG.utg000371l.37 | SHC TRANSFORMING PROTEIN |
PMEG.utg000371l.38 | SHIPPO-1-RELATED |
PMEG.utg000371l.39 | ACID CLUSTER PROTEIN 33 |
PMEG.utg000371l.4 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
PMEG.utg000371l.40 | |
PMEG.utg000371l.41 | MONOACYLGLYCEROL LIPASE |
PMEG.utg000371l.42 | SOLUTE CARRIER FAMILY 33 ACETYL-COA TRANSPORTER -RELATED |
PMEG.utg000371l.43 | |
PMEG.utg000371l.44 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
PMEG.utg000371l.45 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
PMEG.utg000371l.46 | ALKALINE PHOSPHATASE |
PMEG.utg000371l.47 | ALKALINE PHOSPHATASE |
PMEG.utg000371l.48 | SERINE-THREONINE PROTEIN KINASE |
PMEG.utg000371l.49 | |
PMEG.utg000371l.5 | GUANYLYL CYCLASE |
PMEG.utg000371l.50 | REPRESSOR OF YIELD OF DENV PROTEIN |
PMEG.utg000371l.51 | CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26 |
PMEG.utg000371l.52 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
PMEG.utg000371l.53 | DYNACTIN SUBUNIT 3 |
PMEG.utg000371l.54 | VESICLE PROTEIN SORTING-ASSOCIATED |
PMEG.utg000371l.55 | SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL |
PMEG.utg000371l.56 | CYCLINS |
PMEG.utg000371l.57 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
PMEG.utg000371l.58 | INSULIN GENE ENHANCER PROTEIN |
PMEG.utg000371l.59 | INSULIN GENE ENHANCER PROTEIN |
PMEG.utg000371l.6 | NATRIURETIC PEPTIDE RECEPTOR 3-RELATED |
PMEG.utg000371l.60 | S PHASE CYCLIN A-ASSOCIATED PROTEIN IN THE ENDOPLASMIC RETICULUM |
PMEG.utg000371l.61 | KERATINOCYTE-ASSOCIATED PROTEIN 2 |
PMEG.utg000371l.62 | TRANSLATION ELONGATION FACTOR-RELATED |
PMEG.utg000371l.63 | SYNTENIN RELATED |
PMEG.utg000371l.64 | HEAT SHOCK FACTOR 2-BINDING PROTEIN |
PMEG.utg000371l.7 | HEAVYWEIGHT, ISOFORM A |
PMEG.utg000371l.8 | |
PMEG.utg000371l.9 |