The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000398l.5 | ACTIN FILAMENT-ASSOCIATED PROTEIN 1 FAMILY MEMBER |
PMEG.utg000398l.7 | PORCUPINE |
PMEG.utg000398l.8 | TRANSCRIPTIONAL REPRESSOR PROTEIN YY |
PMEG.utg000398l.9 | C3ORF6 PROTEIN-RELATED |
PMEG.utg000399l.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
PMEG.utg000399l.10 | |
PMEG.utg000399l.11 | NCK-ASSOCIATED PROTEIN 5 |
PMEG.utg000399l.2 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
PMEG.utg000399l.3 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
PMEG.utg000399l.4 | PIKACHURIN-LIKE PROTEIN |
PMEG.utg000399l.5 | PIKACHURIN-LIKE PROTEIN |
PMEG.utg000399l.6 | VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA SUBUNIT |
PMEG.utg000399l.7 | MITOCHONDRIAL DIVISION PROTEIN 1-RELATED |
PMEG.utg000399l.8 | ELONGATION FACTOR TS |
PMEG.utg000399l.9 | GUANYLATE KINASE-RELATED |
PMEG.utg000400l.1 | |
PMEG.utg000400l.2 | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE |
PMEG.utg000400l.3 | STEREOCILIN RELATED |
PMEG.utg000400l.4 | P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN |
PMEG.utg000400l.5 | HOMEOBOX PROTEIN ARISTALESS |
PMEG.utg000400l.6 | TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 3 |
PMEG.utg000402l.1 | G-PROTEIN COUPLED RECEPTOR |
PMEG.utg000402l.2 | G-PROTEIN COUPLED RECEPTOR TKR-1-RELATED |
PMEG.utg000402l.3 | PROTEIN NJMU-R1 |
PMEG.utg000402l.4 | UNCHARACTERIZED |
PMEG.utg000402l.5 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
PMEG.utg000402l.6 | WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED |
PMEG.utg000402l.7 | NY-REN-58 ANTIGEN |
PMEG.utg000404l.1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
PMEG.utg000408l.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 |
PMEG.utg000408l.10 | GUANYLYL CYCLASE |
PMEG.utg000408l.11 | GUANYLYL CYCLASE |
PMEG.utg000408l.12 | UDP-N-ACETYL-2-AMINO-2-DEOXY-D-GLUCURONATE OXIDASE |
PMEG.utg000408l.13 | NUCLEOLAR PROTEIN 12 |
PMEG.utg000408l.14 | PROTEIN SIDEKICK |
PMEG.utg000408l.15 | PRE-MRNA SPLICING FACTOR PRP31 |
PMEG.utg000408l.16 | COLLAGEN ALPHA |
PMEG.utg000408l.17 | PETER PAN-RELATED |
PMEG.utg000408l.18 | HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN |
PMEG.utg000408l.19 | RIBONUCLEIC ACID BINDING PROTEIN S1 |
PMEG.utg000408l.2 | PROPERDIN |
PMEG.utg000408l.20 | UBIQUITIN-CONJUGATING ENZYME E2 |
PMEG.utg000408l.21 | ADP-RIBOSYLATION-LIKE FACTOR 6-INTERACTING PROTEIN |
PMEG.utg000408l.22 | NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF |
PMEG.utg000408l.23 | AMINOACYL TRNA SYNTHASE COMPLEX-INTERACTING MULTIFUNCTIONAL PROTEIN |
PMEG.utg000408l.24 | CHARGED MULTIVESICULAR BODY PROTEIN |
PMEG.utg000408l.25 | |
PMEG.utg000408l.26 | WD-40 REPEAT PROTEIN |
PMEG.utg000408l.27 | CHECKPOINT SUPPRESSOR 1-LIKE, ISOFORM A-RELATED |
PMEG.utg000408l.28 | TEKTIN |