The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000414l.67 | |
| PMEG.utg000414l.68 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| PMEG.utg000414l.69 | CARBONIC ANHYDRASE |
| PMEG.utg000414l.7 | PURPLE ACID PHOSPHATASE |
| PMEG.utg000414l.70 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| PMEG.utg000414l.71 | |
| PMEG.utg000414l.72 | IRE1-RELATED |
| PMEG.utg000414l.73 | ENGULFMENT AND CELL MOTILITY |
| PMEG.utg000414l.74 | |
| PMEG.utg000414l.75 | ASPARTATE AMINOTRANSFERASE |
| PMEG.utg000414l.76 | NUCLEAR HORMONE RECEPTOR |
| PMEG.utg000414l.77 | DDB1- AND CUL4-ASSOCIATED FACTOR 11 |
| PMEG.utg000414l.78 | N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE |
| PMEG.utg000414l.79 | ALPHA CATENIN |
| PMEG.utg000414l.80 | SYNTAXIN |
| PMEG.utg000414l.81 | SOX TRANSCRIPTION FACTOR |
| PMEG.utg000414l.82 | CRANIOFACIAL DEVELOPMENT PROTEIN 1 |
| PMEG.utg000414l.83 | UNCHARACTERIZED |
| PMEG.utg000414l.9 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| PMEG.utg000416l.1 | HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66 |
| PMEG.utg000416l.2 | RETICULOCALBIN |
| PMEG.utg000416l.3 | TRANSMEMBRANE 9 SUPERFAMILY PROTEIN |
| PMEG.utg000416l.4 | OVOCHYMASE-RELATED |
| PMEG.utg000416l.5 | VILLIN |
| PMEG.utg000417l.1 | L-COA N-ACYLTRANSFERASE-RELATED |
| PMEG.utg000417l.10 | CHITINASE DOMAIN-CONTAINING PROTEIN 1 FAMILY MEMBER |
| PMEG.utg000417l.11 | PUTATIVE TREBLE-CLEF ZINC-FINGER C2ORF42 FAMILY MEMBER |
| PMEG.utg000417l.12 | ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000417l.13 | OXIDOREDUCTASES |
| PMEG.utg000417l.14 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 46 |
| PMEG.utg000417l.15 | PROTEIN FAM204A |
| PMEG.utg000417l.16 | SOLUTE CARRIER FAMILY 22 MEMBER |
| PMEG.utg000417l.2 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
| PMEG.utg000417l.3 | UBIQUITIN THIOESTERASE |
| PMEG.utg000417l.4 | SIGNAL RECOGNITION PARTICLE 72 |
| PMEG.utg000417l.5 | BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE II |
| PMEG.utg000417l.6 | N-MYC DOWNSTREAM REGULATED |
| PMEG.utg000417l.7 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 99 |
| PMEG.utg000417l.8 | HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN |
| PMEG.utg000417l.9 | RAD52 MOTIF-CONTAINING PROTEIN 1 |
| PMEG.utg000418l.1 | HELICASE WITH DEATH DOMAIN-RELATED |
| PMEG.utg000418l.10 | |
| PMEG.utg000418l.11 | BETA-1,4-GALACTOSYLTRANSFERASE |
| PMEG.utg000418l.12 | |
| PMEG.utg000418l.13 | 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER |
| PMEG.utg000418l.14 | SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D |
| PMEG.utg000418l.15 | UNCHARACTERIZED PROTEIN YBCL-RELATED |
| PMEG.utg000418l.16 | CYTOCHROME P450 FAMILY 3 |
| PMEG.utg000418l.2 | CILIA AND FLAGELLA-ASSOCIATED PROTEIN 58-RELATED |
| PMEG.utg000418l.3 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
