About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 245 246 247 248 249 250 251 252 253 254 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_013472-T1RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
OS493_013473-T1CALCIUM BINDING PROTEINS
OS493_013474-T1
OS493_013475-T1
OS493_013476-T1ACROSIN-RELATED
OS493_013477-T1UNCHARACTERIZED
OS493_013478-T1CELL CYCLE CONTROL PROTEIN 50
OS493_013479-T1COLLAGEN ALPHA
OS493_013481-T1DNA-BINDING PROTEIN INHIBITOR
OS493_013482-T1UBX DOMAIN CONTAINING PROTEIN
OS493_013483-T1SH2-SH3 ADAPTOR PROTEIN-RELATED
OS493_013484-T1
OS493_013485-T1RFX TRANSCRIPTION FACTOR FAMILY
OS493_013487-T12-HYDROXYACID DEHYDROGENASE-RELATED
OS493_013491-T1GABA-B RECEPTOR
OS493_013492-T1GABA-B RECEPTOR
OS493_013493-T1GABA-B RECEPTOR
OS493_013494-T1DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
OS493_013495-T1DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
OS493_013496-T1DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
OS493_013497-T1TRANSAMIDASE
OS493_013498-T1TRANSAMIDASE
OS493_013499-T1U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B
OS493_013500-T160S RIBOSOMAL PROTEIN L12
OS493_013501-T1ALPHA-/EPSILON-SARCOGLYCAN FAMILY MEMBER
OS493_013502-T1
OS493_013503-T1N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT
OS493_013504-T1POLY ADP-RIBOSE GLYCOHYDROLASE
OS493_013505-T1POLY ADP-RIBOSE GLYCOHYDROLASE
OS493_013506-T1ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL
OS493_013507-T1ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL
OS493_013508-T1CARBOHYDRATE SULFOTRANSFERASE
OS493_013509-T1CHCHD1
OS493_013510-T1
OS493_013511-T1ACYL-COENZYME A THIOESTERASE-RELATED
OS493_013512-T1ACYL-COENZYME A THIOESTERASE-RELATED
OS493_013513-T140S RIBOSOMAL PROTEIN S24
OS493_013514-T1UNCHARACTERIZED
OS493_013515-T1SYNAPTOTAGMIN
OS493_013516-T1SYNAPTOTAGMIN
OS493_013517-T1SYNAPTOTAGMIN
OS493_013518-T1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
OS493_013519-T1PDZ AND LIM DOMAIN PROTEIN ZASP
OS493_013520-T1
OS493_013521-T1THYMUS, BRAIN AND TESTES-ASSOCIATED
OS493_013522-T1POTASSIUM CHANNEL, SUBFAMILY K
OS493_013523-T1SOLUTE CARRIER FAMILY 17
OS493_013524-T1GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE 1
OS493_013525-T1
OS493_013526-T1
TOP