About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_013245-T1
OS493_013246-T1
OS493_013247-T1
OS493_013248-T1
OS493_013249-T1
OS493_013250-T1OVOCHYMASE-RELATED
OS493_013251-T1
OS493_013252-T1T-SNARE COILED-COIL HOMOLOGY DOMAIN-CONTAINING PROTEIN
OS493_013253-T1CUBILIN-LIKE PROTEIN
OS493_013254-T1FOLLISTATIN-RELATED
OS493_013255-T1
OS493_013257-T1LITHOSTATHINE
OS493_013259-T1
OS493_013260-T1FOLLISTATIN-RELATED
OS493_013261-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
OS493_013262-T1
OS493_013263-T1
OS493_013264-T1
OS493_013265-T1
OS493_013266-T1CYTOCHROME P450 FAMILY 4
OS493_013267-T1CYTOCHROME P450 FAMILY 4
OS493_013268-T1GERANYLGERANYL PYROPHOSPHATE SYNTHASE
OS493_013269-T1
OS493_013270-T1
OS493_013271-T1F5/8 TYPE C DOMAIN-CONTAINING PROTEIN
OS493_013272-T1OVOCHYMASE-RELATED
OS493_013273-T1
OS493_013274-T1
OS493_013275-T1
OS493_013276-T1OVOCHYMASE-RELATED
OS493_013278-T1
OS493_013280-T1
OS493_013281-T1
OS493_013282-T1
OS493_013283-T1
OS493_013284-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
OS493_013286-T1
OS493_013287-T1
OS493_013288-T180 KDA MCM3-ASSOCIATED PROTEIN
OS493_013289-T1
OS493_013290-T1TRANSCRIPTION FACTOR E2F
OS493_013291-T1
OS493_013292-T1
OS493_013293-T1
OS493_013294-T1
OS493_013296-T1OVOCHYMASE-RELATED
OS493_013297-T1
OS493_013298-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
OS493_013299-T1PROTEIN CBG23806
OS493_013301-T1UNCHARACTERIZED
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