About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides53502CCR4-NOT TRANSCRIPTION COMPLEX
Paelopatides53503CCR4-NOT TRANSCRIPTION COMPLEX
Paelopatides53504CCR4-NOT TRANSCRIPTION COMPLEX
Paelopatides53505CCR4-NOT TRANSCRIPTION COMPLEX
Paelopatides53506CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides53507FI04643P-RELATED
Paelopatides53508FI04643P-RELATED
Paelopatides53509FI04643P-RELATED
Paelopatides53510CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
Paelopatides53511FI04643P-RELATED
Paelopatides53512-
Paelopatides53513-
Paelopatides53514-
Paelopatides53515TRANSFORMING ACIDIC COILED-COIL CONTAINING PROTEIN 1/2
Paelopatides53516-
Paelopatides53517TRANSFORMING ACIDIC COILED-COIL CONTAINING PROTEIN 1/2
Paelopatides53518-
Paelopatides53519DED DOMAIN-CONTAINING PROTEIN
Paelopatides53520LEUCOKININ RECEPTOR-RELATED
Paelopatides53521G-PROTEIN COUPLED RECEPTOR
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