About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides52744-
Paelopatides52745-
Paelopatides52746-
Paelopatides52747CYTIDINE DEAMINASE
Paelopatides52748BUCENTAUR RELATED
Paelopatides52749PROTEIN CBG26694
Paelopatides52750SI:CH211-196P9.1-RELATED
Paelopatides52751HEMOPEXIN DOMAIN-CONTAINING PROTEIN
Paelopatides52752BUCENTAUR RELATED
Paelopatides52753-
Paelopatides52754UNCHARACTERIZED
Paelopatides52755TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides52756ENDONUCLEASE-RELATED
Paelopatides52757PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides52758-
Paelopatides52759-
Paelopatides52760-
Paelopatides52761ACID AMIDASE
Paelopatides52762ENDONUCLEASE-RELATED
Paelopatides52763REVERSE TRANSCRIPTASES
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