About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides52682REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides52683-
Paelopatides52684INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides52685-
Paelopatides52686REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides52687BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
Paelopatides52688PARANEOPLASTIC ANTIGEN
Paelopatides52689PIKACHURIN-LIKE PROTEIN
Paelopatides52690EPM2A-INTERACTING PROTEIN 1
Paelopatides52691DESMOGLEIN FAMILY MEMBER
Paelopatides52692PROTEIN CBG26694
Paelopatides52693PROTEIN CBG26694
Paelopatides52694CADHERIN-23
Paelopatides52695GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN
Paelopatides52696FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE
Paelopatides52697FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE
Paelopatides52698REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides52699L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides52700-
Paelopatides52701ALPHA-2,8-SIALYLTRANSFERASE
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