About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides52495-
Paelopatides52496RHO FAMILY GTPASE
Paelopatides52497TUBULIN
Paelopatides52498TUBULIN
Paelopatides52499ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides52500LD33804P
Paelopatides52501-
Paelopatides52502UBIQUITIN THIOESTERASE
Paelopatides52503-
Paelopatides52504METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides52505-
Paelopatides52506PROTEIN CBG26694
Paelopatides52507HEPARAN SULFATE SULFOTRANSFERASE
Paelopatides52508-
Paelopatides52509-
Paelopatides52510CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE
Paelopatides52511MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 1
Paelopatides52512MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 1
Paelopatides52514CHROMATIN COMPLEXES SUBUNIT BAP18-RELATED
Paelopatides52515ZINC FINGER PROTEIN
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