About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides52382RAI16 PROTEIN-RELATED
Paelopatides52383RAI16 PROTEIN-RELATED
Paelopatides52384REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides52385THAP DOMAIN PROTEIN
Paelopatides52386ATP-DEPENDENT DNA HELICASE
Paelopatides52387CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides52388TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides52389ALANYL-TRNA SYNTHETASE
Paelopatides52390PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides52391-
Paelopatides52392REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides52393-
Paelopatides52394-
Paelopatides52395NETRIN RECEPTOR UNC5
Paelopatides52398-
Paelopatides52399SYNAPTONEMAL COMPLEX CENTRAL ELEMENT PROTEIN 2
Paelopatides52400TRANSPOSON
Paelopatides52401THIOREDOXIN
Paelopatides52402PROTEIN CBG26694
Paelopatides52405-
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