About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides52362CYSTEINE-RICH MOTOR NEURON 1 PROTEIN
Paelopatides52363-
Paelopatides52364ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides52365-
Paelopatides52366-
Paelopatides52367-
Paelopatides52368FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides52369ARYLACETAMIDE DEACETYLASE
Paelopatides52370TRANSMEMBRANE PROTEIN 256
Paelopatides52371TRANSMEMBRANE 9 SUPERFAMILY PROTEIN
Paelopatides52372-
Paelopatides52373-
Paelopatides52374TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides52375E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED
Paelopatides52376-
Paelopatides52377BETA-ALANINE-ACTIVATING ENZYME
Paelopatides52378BETA-ALANINE-ACTIVATING ENZYME
Paelopatides52379L-ASPARAGINASE
Paelopatides5238040S RIBOSOMAL PROTEIN S3A
Paelopatides52381WD40 REPEAT PROTEINPRL1/PRL2-RELATED
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