About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides52516IP01015P-RELATED
Paelopatides52517LSM12 HOMOLOG
Paelopatides52518I[[H]] CHANNEL, ISOFORM E
Paelopatides52519REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides52520FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides52521-
Paelopatides52522FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides52523-
Paelopatides52524DNA HELICASE RECQ FAMILY MEMBER
Paelopatides52525-
Paelopatides52526-
Paelopatides52527ENDONUCLEASE-RELATED
Paelopatides52528TUBULIN
Paelopatides52529SOLUTE CARRIER FAMILY 35
Paelopatides52530PROTEIN CBG26694
Paelopatides52531PROTEIN CBG26694
Paelopatides52532MYOSIN VII, XV
Paelopatides52533MYOSIN VII, XV
Paelopatides52534LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides52535-
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