About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49918REVERSE TRANSCRIPTASES
Paelopatides49919BUCENTAUR RELATED
Paelopatides49920-
Paelopatides49921SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides49922PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides49923-
Paelopatides49924-
Paelopatides49925OXYSTEROL-BINDING PROTEIN-RELATED
Paelopatides49926-
Paelopatides49927ALPHA- 1,3 -FUCOSYLTRANSFERASE
Paelopatides49928ALPHA- 1,3 -FUCOSYLTRANSFERASE
Paelopatides499295-HYDROXYTRYPTAMINE RECEPTOR
Paelopatides49930-
Paelopatides49931PROTEIN CBG26694
Paelopatides49932PROTEIN CBG26694
Paelopatides49933ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides49934NETRIN RECEPTOR UNC5
Paelopatides49935-
Paelopatides49936-
Paelopatides49937DNA2/NAM7 HELICASE FAMILY MEMBER
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