About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49897ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1
Paelopatides49898G-PROTEIN COUPLED RECEPTOR
Paelopatides49899UNCHARACTERIZED
Paelopatides49900-
Paelopatides49901HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides49902NETRIN RECEPTOR UNC5
Paelopatides49903-
Paelopatides49904-
Paelopatides49905PRE-MRNA SPLICING FACTOR
Paelopatides49906REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides49907-
Paelopatides49908-
Paelopatides49909SOX TRANSCRIPTION FACTOR
Paelopatides49910COILED-COIL DOMAIN-CONTAINING PROTEIN 39
Paelopatides49911PROTEIN CBG26694
Paelopatides49912RAN GTPASE-ACTIVATING PROTEIN 1
Paelopatides49913HEAT SHOCK 70 KDA PROTEIN 14
Paelopatides49914PROTEIN CBG26694
Paelopatides49915ENZYMATIC POLYPROTEIN-RELATED
Paelopatides49916UNCHARACTERIZED
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