About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49850PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1
Paelopatides49851QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1
Paelopatides49852REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides49853BUCENTAUR RELATED
Paelopatides49854TYROSINE-PROTEIN KINASE
Paelopatides49855EPM2A-INTERACTING PROTEIN 1
Paelopatides49856TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides49857-
Paelopatides49858-
Paelopatides49859CASEIN KINASE II SUBUNIT BETA
Paelopatides49860-
Paelopatides49861PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Paelopatides49862GH3 DOMAIN-CONTAINING PROTEIN
Paelopatides49863-
Paelopatides49864MICROSOMAL GLUTATHIONE S-TRANSFERASE 1
Paelopatides49865THROMBOSPONDIN
Paelopatides49866PROPERDIN
Paelopatides49868ENDONUCLEASE-RELATED
Paelopatides49869-
Paelopatides49870-
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