About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49765-
Paelopatides49766TOL-PAL SYSTEM PROTEIN TOLA
Paelopatides49767TOL-PAL SYSTEM PROTEIN TOLA
Paelopatides49768TOL-PAL SYSTEM PROTEIN TOLA
Paelopatides49769TOL-PAL SYSTEM PROTEIN TOLA
Paelopatides49770TOL-PAL SYSTEM PROTEIN TOLA
Paelopatides49771TOL-PAL SYSTEM PROTEIN TOLA
Paelopatides49772COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Paelopatides49773-
Paelopatides49774TRANSCRIPTIONAL REPRESSOR PROTEIN YY
Paelopatides49775MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides49776INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN
Paelopatides49777-
Paelopatides49778-
Paelopatides49779SI:CH211-108C17.2-RELATED-RELATED
Paelopatides49780SIDEROFLEXIN
Paelopatides49781-
Paelopatides49782SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D
Paelopatides49783CYCLINS
Paelopatides49784-
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