About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49875PROTEIN CBG26694
Paelopatides49876-
Paelopatides49877-
Paelopatides49878-
Paelopatides49879-
Paelopatides49880-
Paelopatides49881THAP DOMAIN PROTEIN
Paelopatides49882-
Paelopatides49883EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT
Paelopatides49884EGALITARIAN, ISOFORM B
Paelopatides49885TUDOR DOMAIN CONTAINING PROTEIN
Paelopatides49887VANG-LIKE PROTEIN
Paelopatides49888VANG-LIKE PROTEIN
Paelopatides49889-
Paelopatides49890-
Paelopatides4989152 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides49892ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Paelopatides49893DNAJ HOMOLOG SUBFAMILY C MEMBER 22
Paelopatides49894-
Paelopatides49895-
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