About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48749AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides48750UNCHARACTERIZED
Paelopatides48751-
Paelopatides48752-
Paelopatides48753-
Paelopatides48754LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Paelopatides48755PROTEIN CBG26694
Paelopatides48756ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides48757UNCHARACTERIZED
Paelopatides48758INTIMAL THICKNESS RECEPTOR-RELATED
Paelopatides48759PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides48760REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides48761-
Paelopatides48762-
Paelopatides48763PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides48764-
Paelopatides48765SI:CH211-196P9.1-RELATED
Paelopatides48766-
Paelopatides48767NETRIN RECEPTOR UNC5
Paelopatides48779FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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