About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48801ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides48802-
Paelopatides48803-
Paelopatides48804PROTEIN CBG26694
Paelopatides48805-
Paelopatides488065'-NUCLEOTIDASE-RELATED
Paelopatides48807-
Paelopatides48808-
Paelopatides48809CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides48810ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides48811-
Paelopatides48812EXPRESSED PROTEIN
Paelopatides48813CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
Paelopatides48814CRUMBS FAMILY MEMBER
Paelopatides48815ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides48816-
Paelopatides48817PROTEIN CBG26694
Paelopatides48818FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides48819PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Paelopatides48820FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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