About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48683CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides48684IG-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides48685-
Paelopatides48686-
Paelopatides48687OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Paelopatides48688-
Paelopatides48689-
Paelopatides48690UNCHARACTERIZED
Paelopatides48691PEROXISOMAL TRANS-2-ENOYL-COA REDUCTASE
Paelopatides48692GLYCEROL-3-PHOSPHATE DEHYDROGENASE
Paelopatides48693PROTEIN CBG26694
Paelopatides48694PROTEIN CBG26694
Paelopatides48695IP13529P
Paelopatides48696-
Paelopatides48697GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides48698ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides48699HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
Paelopatides48700RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides48701-
Paelopatides48703AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
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