About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48729OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Paelopatides48730POL PROTEIN
Paelopatides48731SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Paelopatides48732REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides48733-
Paelopatides48734EXPRESSED PROTEIN
Paelopatides48735HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
Paelopatides48736CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides48737-
Paelopatides48738DENTIN SIALOPHOSPHOPROTEIN
Paelopatides48739B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides48740NG5
Paelopatides48741-
Paelopatides48742-
Paelopatides48743THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9
Paelopatides48744-
Paelopatides48745FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides48746FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides48747AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides48748AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
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