About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48707PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides48708UNCHARACTERIZED
Paelopatides48709TEX2 PROTEIN-RELATED
Paelopatides48711-
Paelopatides48712-
Paelopatides48713DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides48714-
Paelopatides48715ENDOGLIN/TGF-BETA RECEPTOR TYPE III
Paelopatides48716-
Paelopatides48717NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides48718-
Paelopatides48719-
Paelopatides48720PROTEIN CBG26694
Paelopatides48721-
Paelopatides48722-
Paelopatides48723-
Paelopatides48724NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides48726RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides48727DNA REPAIR-SCAFFOLDING PROTEIN SPIDR
Paelopatides48728OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
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