About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48515REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides48516ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides48517TETRATRICOPEPTIDE REPEAT PROTEIN 32
Paelopatides48518-
Paelopatides48519TRANSLATIONAL ACTIVATOR GCN1-RELATED
Paelopatides48520TRANSLATIONAL ACTIVATOR GCN1-RELATED
Paelopatides48522CENTROMERE PROTEIN E
Paelopatides48523GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides48524GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides48525GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides48526-
Paelopatides48527GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides48528-
Paelopatides48529ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides48530ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides48531-
Paelopatides48532REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides48533-
Paelopatides48534VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Paelopatides48535FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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