About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_010744-T1
OS493_010745-T1
OS493_010746-T1
OS493_010747-T1
OS493_010748-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
OS493_010749-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
OS493_010750-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
OS493_010751-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
OS493_010752-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
OS493_010753-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
OS493_010754-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
OS493_010755-T1
OS493_010756-T1
OS493_010757-T1
OS493_010758-T1
OS493_010759-T1BETA-GALACTOSIDASE RELATED
OS493_010760-T1BETA-GALACTOSIDASE RELATED
OS493_010761-T1
OS493_010762-T1BETA-GALACTOSIDASE RELATED
OS493_010763-T1ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1
OS493_010764-T1ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1
OS493_010765-T1
OS493_010766-T1DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL
OS493_010767-T1STABILIZER OF AXONEMAL MICROTUBULES 2
OS493_010768-T1
OS493_010769-T1
OS493_010770-T1N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
OS493_010772-T1N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
OS493_010773-T1
OS493_010774-T1
OS493_010775-T1
OS493_010776-T1
OS493_010777-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
OS493_010778-T1
OS493_010779-T1
OS493_010780-T1
OS493_010781-T1
OS493_010782-T1
OS493_010783-T1
OS493_010784-T1
OS493_010785-T1
OS493_010786-T1N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
OS493_010787-T1N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
OS493_010788-T1N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
OS493_010789-T1N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
OS493_010790-T1
OS493_010792-T1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN-RELATED
OS493_010793-T1
OS493_010794-T1
OS493_010795-T1POTASSIUM CHANNEL, SUBFAMILY K
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