About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 192 193 194 195 196 197 198 199 200 201 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_010625-T1
OS493_010626-T1IRE1-RELATED
OS493_010627-T1IRE1-RELATED
OS493_010628-T1TRINUCLEOTIDE REPEAT-CONTAINING GENE 6
OS493_010629-T1
OS493_010632-T1
OS493_010633-T1CUB DOMAIN-CONTAINING PROTEIN
OS493_010634-T1
OS493_010637-T1
OS493_010638-T1
OS493_010639-T1
OS493_010640-T1
OS493_010641-T1CUB DOMAIN-CONTAINING PROTEIN
OS493_010642-T1
OS493_010644-T1DNA LIGASE 1/3 FAMILY MEMBER
OS493_010648-T1
OS493_010650-T1DNA LIGASE 1/3 FAMILY MEMBER
OS493_010651-T1
OS493_010652-T1RHO FAMILY GTPASE
OS493_010653-T1
OS493_010654-T1RHO FAMILY GTPASE
OS493_010655-T1
OS493_010656-T140S RIBOSOMAL PROTEIN S15A
OS493_010657-T1WD-40 REPEAT PROTEIN
OS493_010658-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
OS493_010659-T1WD40 REPEAT DOMAIN 95
OS493_010660-T1
OS493_010661-T1ROLLING PEBBLES, ISOFORM B
OS493_010662-T1
OS493_010663-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
OS493_010664-T1
OS493_010665-T1
OS493_010666-T1
OS493_010667-T1SORTING NEXIN
OS493_010668-T1PHOSPHOMANNOMUTASE
OS493_010669-T1ALPHA-L-FUCOSIDASE
OS493_010670-T1
OS493_010671-T1
OS493_010672-T1
OS493_010673-T1KNIRPS-RELATED PROTEIN-RELATED
OS493_010674-T1EME1 PROTEIN
OS493_010675-T1
OS493_010676-T1
OS493_010678-T1EXPRESSED PROTEIN
OS493_010679-T1EXPRESSED PROTEIN
OS493_010680-T1KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
OS493_010681-T1EXPRESSED PROTEIN
OS493_010682-T1
OS493_010683-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_010684-T1
TOP