About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_010417-T1MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
OS493_010418-T1MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
OS493_010419-T1MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
OS493_010420-T1MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
OS493_010421-T1ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
OS493_010422-T1ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
OS493_010423-T1
OS493_010424-T1MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
OS493_010425-T1MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
OS493_010427-T1MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
OS493_010428-T1MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
OS493_010429-T1MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
OS493_010430-T1
OS493_010431-T1MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
OS493_010432-T1MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
OS493_010434-T1MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
OS493_010435-T1MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
OS493_010436-T1MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
OS493_010437-T1MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
OS493_010438-T1
OS493_010439-T1
OS493_010440-T1MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
OS493_010441-T1MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
OS493_010442-T1MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
OS493_010445-T1DIACYLGLYCEROL KINASE
OS493_010446-T1
OS493_010447-T1DIACYLGLYCEROL KINASE
OS493_010448-T1STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 15
OS493_010449-T1
OS493_010450-T1
OS493_010451-T1
OS493_010452-T1
OS493_010453-T1RAGULATOR COMPLEX PROTEIN LAMTOR4
OS493_010454-T1
OS493_010455-T1T4-TYPE LYSOZYME 1-RELATED
OS493_010456-T1PROTEIN ECT2
OS493_010457-T1PROTEIN ECT2
OS493_010458-T1PROTEIN ECT2
OS493_010459-T1
OS493_010460-T1YES-ASSOCIATED PROTEIN YAP1 FAMILY MEMBER
OS493_010461-T1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 300
OS493_010462-T1
OS493_010463-T1
OS493_010464-T1UNCHARACTERIZED
OS493_010465-T1UNCHARACTERIZED
OS493_010466-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED
OS493_010467-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED
OS493_010468-T1
OS493_010470-T1RFX TRANSCRIPTION FACTOR FAMILY
OS493_010471-T1
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