About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_010209-T1
OS493_010210-T1ARYLSULFATASE
OS493_010211-T1ARYLSULFATASE
OS493_010212-T1
OS493_010213-T1TUMOR NECROSIS FACTOR FAMILY MEMBER
OS493_010214-T1TUMOR NECROSIS FACTOR FAMILY MEMBER
OS493_010215-T1TUMOR NECROSIS FACTOR FAMILY MEMBER
OS493_010216-T1TUMOR NECROSIS FACTOR FAMILY MEMBER
OS493_010217-T1TUMOR NECROSIS FACTOR FAMILY MEMBER
OS493_010218-T1TUMOR NECROSIS FACTOR FAMILY MEMBER
OS493_010219-T1TUMOR NECROSIS FACTOR FAMILY MEMBER
OS493_010220-T1PHOSPHOLIPID SCRAMBLASE-RELATED
OS493_010221-T1RING BOX
OS493_010222-T1RP42 RELATED
OS493_010223-T1RP42 RELATED
OS493_010224-T1CELL CYCLE CONTROL PROTEIN CWF15
OS493_010226-T1UNCHARACTERIZED
OS493_010227-T1
OS493_010229-T1
OS493_010230-T1RAN BINDING PROTEIN
OS493_010231-T1RAN BINDING PROTEIN
OS493_010232-T1
OS493_010233-T1RAN BINDING PROTEIN
OS493_010234-T1RAN BINDING PROTEIN
OS493_010235-T1RAN BINDING PROTEIN
OS493_010236-T1RAN BINDING PROTEIN
OS493_010238-T1
OS493_010239-T1
OS493_010240-T1MANNOSE-6-PHOSPHATE ISOMERASE
OS493_010241-T1ECTO-NOX DISULFIDE-THIOL EXCHANGER
OS493_010242-T1
OS493_010243-T1G-PROTEIN COUPLED RECEPTOR
OS493_010244-T1TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
OS493_010246-T1CYTOSINE DEAMINASE FAMILY MEMBER
OS493_010247-T1ARGININOSUCCINATE LYASE
OS493_010248-T1ARGININOSUCCINATE LYASE
OS493_010249-T1
OS493_010250-T1
OS493_010251-T1INTERFERON-INDUCED PROTEIN 44
OS493_010252-T1PHOSPHOLIPID SCRAMBLASE-RELATED
OS493_010253-T1GALACTOSE-3-O-SULFOTRANSFERASE
OS493_010254-T1CYTOCHROME P450
OS493_010255-T1CYTOCHROME P450 FAMILY 3
OS493_010256-T1TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
OS493_010257-T1
OS493_010258-T1
OS493_010259-T1
OS493_010260-T1
OS493_010261-T1
OS493_010262-T1TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
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