About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 185 186 187 188 189 190 191 192 193 194 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_010263-T1EGF-LIKE-DOMAIN, MULTIPLE 7, 8
OS493_010264-T1CYTOCHROME P450 FAMILY 3
OS493_010265-T1EGF-LIKE-DOMAIN, MULTIPLE 7, 8
OS493_010266-T1
OS493_010267-T1
OS493_010268-T1-
OS493_010269-T1
OS493_010270-T1
OS493_010271-T1PHOSPHOLIPID SCRAMBLASE-RELATED
OS493_010272-T1CYTOCHROME P450 FAMILY 3
OS493_010273-T1CARBOHYDRATE SULFOTRANSFERASE
OS493_010274-T1CULLIN
OS493_010275-T1BTK-BINDING PROTEIN-RELATED
OS493_010276-T1CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5
OS493_010277-T1UNCHARACTERIZED
OS493_010278-T1UNCHARACTERIZED
OS493_010279-T1VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 8
OS493_010280-T1VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 8
OS493_010281-T1ASPARTYL PROTEASE-RELATED
OS493_010282-T14-NITROPHENYLPHOSPHATASE-RELATED
OS493_010283-T1
OS493_010284-T1AUTOPHAGY PROTEIN 16-LIKE
OS493_010285-T1E3 UBIQUITIN-PROTEIN LIGASE PPP1R11-RELATED
OS493_010286-T1DNAJ HOMOLOG SUBFAMILY C MEMBER 12
OS493_010287-T1CLATHRIN HEAVY CHAIN RELATED
OS493_010288-T1BOMBESIN RECEPTOR-ACTIVATED PROTEIN C6ORF89
OS493_010289-T1
OS493_010290-T1
OS493_010291-T1SODIUM/POTASSIUM/CALCIUM EXCHANGER
OS493_010292-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_010293-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_010294-T1UBIQUITIN-FOLD MODIFIER-CONJUGATING ENZYME 1
OS493_010295-T1
OS493_010296-T1B-CELL TRANSLOCATION GENE
OS493_010297-T1LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEIN
OS493_010298-T1LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEIN
OS493_010299-T1
OS493_010300-T1LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEIN
OS493_010301-T1
OS493_010302-T1
OS493_010303-T1CENTROBIN
OS493_010304-T1CENTROBIN
OS493_010305-T1PROTEIN MIS12 HOMOLOG
OS493_010306-T1
OS493_010307-T1ORIGIN RECOGNITION COMPLEX SUBUNIT 3
OS493_010308-T1
OS493_010309-T1ORIGIN RECOGNITION COMPLEX SUBUNIT 3
OS493_010310-T1
OS493_010311-T1KH DOMAIN CONTAINING RNA BINDING PROTEIN
OS493_010312-T1
TOP