About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 181 182 183 184 185 186 187 188 189 190 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_010051-T12,5-DIKETO-D-GLUCONIC ACID REDUCTASE
OS493_010052-T12,5-DIKETO-D-GLUCONIC ACID REDUCTASE
OS493_010053-T12,5-DIKETO-D-GLUCONIC ACID REDUCTASE
OS493_010054-T1
OS493_010055-T1GRANULIN
OS493_010056-T1
OS493_010057-T1LIPOXYGENASE
OS493_010058-T1LIPOXYGENASE
OS493_010059-T1
OS493_010060-T1LIPOXYGENASE
OS493_010061-T1COLLAGEN ALPHA
OS493_010062-T1
OS493_010063-T1LIPOXYGENASE
OS493_010064-T1LIPOXYGENASE
OS493_010065-T1UBIQUITINATION FACTOR E4
OS493_010066-T1
OS493_010067-T1TRANSMEMBRANE PROTEIN 208
OS493_010068-T1
OS493_010069-T1MRNA GUANINE-7- METHYLTRANSFERASE
OS493_010070-T1ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-BINDING PROTEIN
OS493_010071-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
OS493_010072-T1MOLTING PROTEIN MLT-4
OS493_010073-T1PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
OS493_010074-T1
OS493_010075-T1
OS493_010076-T1
OS493_010077-T1ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
OS493_010078-T1G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER
OS493_010079-T1PROTEIN CBG13728
OS493_010080-T1
OS493_010081-T1PROTEIN CBG13728
OS493_010082-T1TNF RECEPTOR ASSOCIATED FACTOR
OS493_010083-T1SMALL INTEGRAL MEMBRANE PROTEIN 15
OS493_010084-T1EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN
OS493_010085-T1TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
OS493_010086-T1GUANINE NUCLEOTIDE EXCHANGE FACTOR
OS493_010087-T1SERINE/THREONINE-PROTEIN KINASE RIO1
OS493_010088-T1REGULATORY PROTEIN ZESTE
OS493_010089-T1REGULATORY PROTEIN ZESTE
OS493_010090-T1
OS493_010091-T1
OS493_010092-T1
OS493_010093-T1LEUCINE-RICH REPEAT, ISOFORM F-RELATED
OS493_010094-T14-HYDROXY-4-METHYL-2-OXOGLUTARATE ALDOLASE 3-RELATED
OS493_010095-T1BETA-CAROTENE DIOXYGENASE
OS493_010096-T1BETA-CAROTENE DIOXYGENASE
OS493_010097-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_010098-T1NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 3
OS493_010099-T1RAS-RELATED PROTEIN RAB
OS493_010100-T1-
TOP