About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 177 178 179 180 181 182 183 184 185 186 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_009844-T1CALPONIN
OS493_009845-T1CALPONIN
OS493_009846-T1
OS493_009847-T1CALPONIN
OS493_009848-T1CALPONIN
OS493_009849-T1NADH DEHYDROGENASE (UBIQUINONE) 1 BETA SUBCOMPLEX, 4
OS493_009850-T1FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
OS493_009851-T1ARMADILLO REPEAT CONTAINING 2
OS493_009852-T1ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4
OS493_009853-T1SORBITOL DEHYDROGENASE
OS493_009854-T1PROTEASOME ASSEMBLY CHAPERONE 1
OS493_009855-T1MAP KINASE KINASE KINASE SSK2-RELATED-RELATED
OS493_009856-T1SERINE-THREONINE PROTEIN KINASE
OS493_009857-T1
OS493_009858-T1
OS493_009859-T1
OS493_009860-T1
OS493_009861-T1
OS493_009862-T1ANDROGLOBIN
OS493_009863-T1ANDROGLOBIN
OS493_009864-T15'-NUCLEOTIDASE-RELATED
OS493_009865-T1WD40 REPEAT FAMILY
OS493_009866-T1RIBOSOMAL PROTEIN S6 KINASE
OS493_009867-T1RIBOSOMAL PROTEIN S6 KINASE
OS493_009868-T1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
OS493_009869-T1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
OS493_009870-T1
OS493_009871-T1
OS493_009872-T1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
OS493_009873-T1
OS493_009874-T1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
OS493_009875-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
OS493_009876-T1GABA-B RECEPTOR
OS493_009877-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_009878-T1G-PROTEIN COUPLED RECEPTOR
OS493_009879-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_009880-T1GABA-B RECEPTOR
OS493_009881-T1PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER
OS493_009882-T1PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER
OS493_009883-T1LANC-LIKE PROTEIN
OS493_009884-T1
OS493_009885-T1
OS493_009886-T1
OS493_009887-T1
OS493_009888-T1
OS493_009889-T1SI:CH211-266K2.1
OS493_009890-T1F-BOX FAMILY PROTEIN
OS493_009891-T1F-BOX FAMILY PROTEIN
OS493_009892-T1SJOEGREN SYNDROME NUCLEAR AUTOANTIGEN 1
OS493_009893-T1HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN
TOP