About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_009946-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_009947-T1
OS493_009948-T1ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
OS493_009949-T1ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
OS493_009950-T1ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
OS493_009951-T1
OS493_009952-T1ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
OS493_009953-T1ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
OS493_009954-T1
OS493_009955-T1
OS493_009956-T1
OS493_009957-T1ATM INTERACTOR
OS493_009958-T1RIBONUCLEASE P PROTEIN SUBUNIT P40
OS493_009959-T1CENTROMERE PROTEIN N
OS493_009960-T1UBIQUITIN-ACTIVATING ENZYME E1
OS493_009961-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL 4-ASSOCIATED PROTEIN TCPC4AP
OS493_009962-T1
OS493_009963-T1
OS493_009964-T1
OS493_009965-T1
OS493_009966-T1
OS493_009967-T1BROMODOMAIN CONTAINING PROTEIN
OS493_009968-T1UNCHARACTERIZED
OS493_009969-T1PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
OS493_009970-T1
OS493_009971-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_009972-T1CALBINDIN
OS493_009973-T1CALBINDIN
OS493_009974-T1
OS493_009975-T1ADRENOCORTICAL DYSPLASIA PROTEIN ACD
OS493_009976-T1UNCHARACTERIZED
OS493_009977-T1UNCHARACTERIZED
OS493_009978-T1UNCHARACTERIZED
OS493_009980-T1
OS493_009981-T1
OS493_009982-T1F-BOX/WD REPEAT-CONTAINING PROTEIN 2
OS493_009983-T1REGULATORY PROTEIN ZESTE
OS493_009985-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
OS493_009986-T1
OS493_009987-T1OTU DOMAIN CONTAINING PROTEIN
OS493_009988-T1
OS493_009989-T1
OS493_009990-T1
OS493_009991-T1
OS493_009992-T1
OS493_009993-T1
OS493_009994-T1
OS493_009995-T1
OS493_009996-T1
OS493_009997-T1
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