About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_009998-T1
OS493_009999-T1
OS493_010000-T1PEPTIDASE S8
OS493_010001-T1
OS493_010002-T1
OS493_010003-T1
OS493_010004-T1
OS493_010005-T1
OS493_010006-T1
OS493_010007-T1INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER
OS493_010008-T1
OS493_010009-T1PEPTIDE DEFORMYLASE
OS493_010010-T1
OS493_010011-T1
OS493_010012-T13-KETODIHYDROSPHINGOSINE REDUCTASE
OS493_010013-T1PAR-6-RELATED
OS493_010014-T1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 60
OS493_010015-T1TRANSFERRIN
OS493_010016-T1
OS493_010017-T1TRANSFERRIN
OS493_010018-T1TRANSFERRIN
OS493_010019-T1
OS493_010020-T1TRANSFERRIN
OS493_010021-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_010022-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_010023-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_010024-T1REGULATORY PROTEIN ZESTE
OS493_010025-T1
OS493_010026-T1
OS493_010027-T1
OS493_010028-T115-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)]
OS493_010029-T115-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)]
OS493_010030-T1
OS493_010031-T115-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)]
OS493_010034-T1REGULATORY PROTEIN ZESTE
OS493_010035-T1REGULATORY PROTEIN ZESTE
OS493_010036-T1PHOSPHORYLASE B KINASE REGULATORY SUBUNIT
OS493_010037-T1PHOSPHORYLASE B KINASE REGULATORY SUBUNIT
OS493_010038-T1
OS493_010039-T1
OS493_010040-T1MDM2-BINDING PROTEIN
OS493_010041-T1MDM2-BINDING PROTEIN
OS493_010042-T1LEUCINE AMINOPEPTIDASE-RELATED
OS493_010043-T1NADH DEHYDROGENASE UBIQUINONE FLAVOPROTEIN 2, MITOCHONDRIAL
OS493_010044-T1DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL
OS493_010045-T1EF-HAND DOMAIN-CONTAINING PROTEIN
OS493_010046-T1SEPTIN
OS493_010047-T1TRANSMEMBRANE PROTEIN 143 FAMILY MEMBER
OS493_010048-T1AGAP008228-PA
OS493_010050-T1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
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