About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 176 177 178 179 180 181 182 183 184 185 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_009793-T1
OS493_009794-T1MYOSIN
OS493_009795-T1MYOSIN
OS493_009796-T1MYOSIN
OS493_009797-T1FATTY-ACID AMIDE HYDROLASE
OS493_009798-T1
OS493_009799-T1P53 REGULATED PA26 NUCLEAR PROTEIN SESTRIN
OS493_009800-T1POLYCOMB GROUP PROTEIN
OS493_009801-T1POLYCOMB GROUP PROTEIN
OS493_009802-T1
OS493_009803-T1FORKHEAD BOX PROTEIN O
OS493_009804-T1DNA POLYMERASE ZETA CATALYTIC SUBUNIT
OS493_009805-T1
OS493_009806-T1
OS493_009807-T1DNA POLYMERASE ZETA CATALYTIC SUBUNIT
OS493_009808-T1DNA POLYMERASE ZETA CATALYTIC SUBUNIT
OS493_009809-T1OXIDORED-NITRO DOMAIN-CONTAINING PROTEIN
OS493_009810-T1BLR2807 PROTEIN
OS493_009811-T1PR DOMAIN ZINC FINGER PROTEIN
OS493_009812-T1
OS493_009813-T1
OS493_009814-T11-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED
OS493_009815-T1U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14
OS493_009816-T1RNA RECOGNITION MOTIF-CONTAINING
OS493_009817-T1
OS493_009818-T1
OS493_009819-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 181
OS493_009820-T1
OS493_009821-T1CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT B
OS493_009822-T1RING FINGER PROTEIN 17
OS493_009823-T1RING FINGER PROTEIN 17
OS493_009824-T1
OS493_009825-T1BRIX DOMAIN CONTAINING PROTEIN
OS493_009826-T1SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 3
OS493_009827-T1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4
OS493_009828-T1KINETOCHORE PROTEIN NDC80
OS493_009829-T1APOLIPOPROTEIN L
OS493_009830-T1APOLIPOPROTEIN L
OS493_009831-T1KINETOCHORE PROTEIN NDC80
OS493_009832-T1RAS-RELATED PROTEIN RAB
OS493_009833-T1COLLAGEN ALPHA
OS493_009834-T1PERIAXIN-LIKE
OS493_009835-T1MULTICOPPER OXIDASE-RELATED
OS493_009836-T1MULTICOPPER OXIDASE-RELATED
OS493_009838-T1
OS493_009839-T1SI:CH211-266K2.1
OS493_009840-T1MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER
OS493_009841-T1MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER
OS493_009842-T1
OS493_009843-T1
TOP