About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 171 172 173 174 175 176 177 178 179 180 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_009533-T1LEUCOKININ RECEPTOR-RELATED
OS493_009534-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
OS493_009535-T1
OS493_009536-T1OS08G0560600 PROTEIN
OS493_009537-T1
OS493_009538-T1
OS493_009539-T1SKICH DOMAIN-CONTAINING PROTEIN
OS493_009540-T1RAD50
OS493_009541-T1G-PROTEIN COUPLED RECEPTOR
OS493_009542-T1CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81
OS493_009543-T1
OS493_009544-T1UPF0041 BRAIN PROTEIN 44-RELATED
OS493_009545-T1TRANSMEMBRANE PROTEIN 242
OS493_009546-T1ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN
OS493_009547-T1
OS493_009548-T1
OS493_009549-T1ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL
OS493_009550-T1BTK-BINDING PROTEIN-RELATED
OS493_009551-T1
OS493_009552-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
OS493_009553-T1CENTROSOMAL PROTEIN OF 162 KDA
OS493_009554-T1SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED
OS493_009555-T1SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED
OS493_009556-T1PEST PROTEOLYTIC SIGNAL-CONTAINING NUCLEAR PROTEIN
OS493_009557-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_009558-T1PYRROLINE-5-CARBOXYLATE REDUCTASE
OS493_009559-T1BLR2807 PROTEIN
OS493_009560-T1SEC63 DOMAIN-CONTAINING
OS493_009561-T1DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
OS493_009562-T1LOC100145250 PROTEIN
OS493_009563-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 81
OS493_009564-T1WD REPEAT CONTAINING PROTEIN 3 WDR3
OS493_009565-T1WD REPEAT CONTAINING PROTEIN 3 WDR3
OS493_009566-T1
OS493_009567-T1UBIQUITIN-CONJUGATING ENZYME E2
OS493_009568-T1
OS493_009569-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
OS493_009570-T1DYNEIN HEAVY CHAIN FAMILY PROTEIN
OS493_009571-T1DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
OS493_009572-T1DYNEIN HEAVY CHAIN FAMILY PROTEIN
OS493_009573-T1MALE FERTILITY FACTOR KL5
OS493_009574-T1PLASMINOGEN-RELATED
OS493_009576-T1INOSITOL 5-PHOSPHATASE
OS493_009577-T1WD REPEAT AND COILED-COIL-CONTAINING PROTEIN
OS493_009578-T1
OS493_009579-T1URINARY PROTEIN RUP /ACROSOMAL PROTEIN SP-10
OS493_009580-T1
OS493_009582-T1ALDO/KETO REDUCTASE
OS493_009583-T1ALDO/KETO REDUCTASE
OS493_009584-T1SERINE/THREONINE-PROTEIN KINASE ATM
TOP