About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_009367-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_009368-T1
OS493_009369-T1
OS493_009370-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_009371-T1
OS493_009372-T1SH3 MULTIPLE DOMAIN
OS493_009373-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
OS493_009374-T1M-PHASE PHOSPHOPROTEIN 9
OS493_009375-T1
OS493_009376-T1PROBABLE PEPTIDE CHAIN RELEASE FACTOR C12ORF65
OS493_009377-T1DELETED IN ORAL CANCER 1/CDK2-ASSOCIATED PROTEIN 1
OS493_009378-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 189
OS493_009379-T1
OS493_009380-T1UBIQUITIN-PROTEIN LIGASE E3C
OS493_009381-T1POLYCOMB GROUP PROTEIN
OS493_009382-T1
OS493_009383-T1GTPASE, IMAP FAMILY MEMBER-RELATED
OS493_009384-T1
OS493_009386-T1GTPASE, IMAP FAMILY MEMBER-RELATED
OS493_009387-T1SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED
OS493_009388-T1SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED
OS493_009389-T1G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE
OS493_009390-T1
OS493_009391-T1BEN DOMAIN-CONTAINING PROTEIN 3
OS493_009392-T1UNCHARACTERIZED
OS493_009393-T1COILIN
OS493_009394-T1NA+/CA2+ K+ INDEPENDENT EXCHANGER
OS493_009395-T1NA+/CA2+ K+ INDEPENDENT EXCHANGER
OS493_009396-T1
OS493_009397-T1UNCHARACTERIZED
OS493_009398-T1
OS493_009399-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_009400-T1GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
OS493_009401-T1GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
OS493_009402-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 189
OS493_009403-T1
OS493_009404-T1GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
OS493_009405-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_009406-T1
OS493_009407-T1
OS493_009408-T1PHOSPHOLIPASE B-RELATED
OS493_009409-T1PHOSPHOLIPASE B-RELATED
OS493_009410-T1GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
OS493_009411-T1
OS493_009412-T1
OS493_009413-T1PIRNA BIOGENESIS PROTEIN EXD1
OS493_009414-T1UNCHARACTERIZED
OS493_009415-T1UNCHARACTERIZED
OS493_009416-T1UNCHARACTERIZED
OS493_009417-T1KINESIN-RELATED
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