About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_010573-T1RING FINGER PROTEIN 141-RELATED
OS493_010574-T1RIBONUCLEASE P SUBUNIT P25
OS493_010575-T1SPLICING FACTOR 3B, SUBUNIT 1-RELATED
OS493_010576-T1
OS493_010577-T1
OS493_010578-T1
OS493_010579-T1
OS493_010580-T1
OS493_010581-T1
OS493_010582-T1
OS493_010583-T1
OS493_010584-T1
OS493_010585-T1
OS493_010586-T1
OS493_010587-T1
OS493_010588-T1EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
OS493_010589-T1ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN
OS493_010590-T1
OS493_010591-T1
OS493_010592-T1
OS493_010593-T1
OS493_010594-T1
OS493_010595-T1
OS493_010596-T1
OS493_010597-T1FACIOGENITAL DYSPLASIA PROTEIN
OS493_010598-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
OS493_010599-T1FLAVIN MONOAMINE OXIDASE
OS493_010600-T1TETRATRICOPEPTIDE REPEAT PROTEIN 34
OS493_010601-T1TETRATRICOPEPTIDE REPEAT PROTEIN 34
OS493_010602-T1RHO GDP-DISSOCIATION INHIBITOR
OS493_010603-T1PROTEIN DISULFIDE ISOMERASE
OS493_010604-T1
OS493_010605-T1
OS493_010606-T1
OS493_010607-T1
OS493_010609-T1
OS493_010610-T1UNCHARACTERIZED
OS493_010612-T1
OS493_010613-T1
OS493_010614-T1
OS493_010615-T1
OS493_010616-T1
OS493_010617-T1FACIOGENITAL DYSPLASIA PROTEIN
OS493_010618-T1
OS493_010619-T1DNA-3-METHYLADENINE GLYCOSYLASE
OS493_010620-T1LOG FAMILY PROTEIN YJL055W
OS493_010621-T1
OS493_010622-T1
OS493_010623-T1HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN
OS493_010624-T1TEX2 PROTEIN-RELATED
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